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See other LOC101927839 CNV Assays ›
Gene Symbol
LOC101927839
Assay Reference Genome
Location

Chr.17:2233201 on build GRCh38
Cytoband
17p13.3
Assay ID Hs06420131_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 101927839

Gene Name:

 uncharacterized LOC101927839

Gene Aliases:

 -

Location:

 Chr.17:2232678-2233610 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
LOC101927839 NR_110888.1 2 303
BE044566.1 1 422
BI461260.1 2 310

Target Gene Details

Entrez Gene ID:

 23293

Gene Name:

 SMG6, nonsense mediated mRNA decay factor

Gene Aliases:

 C17orf31, EST1A, SMG-6, hSMG5/7a

Location:

 Chr.17:2059839-2303836 on Build GRCh38

Assay Gene Location:

 Within Intron 19
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SMG6 NM_001256827.1 NP_001243756.1
NM_001256828.1 NP_001243757.1
NM_017575.4 NP_060045.4
XM_005256569.3 XP_005256626.1
XM_005256571.4 XP_005256628.1
XM_011523769.2 XP_011522071.1
XM_011523772.2 XP_011522074.1
XM_011523775.2 XP_011522077.1
XM_017024399.1 XP_016879888.1
AB018275.2
AK024131.1 BAB14835.1
AK074270.1
AK302964.1
AY145883.1 AAN46114.1
AY168921.1 AAO17581.1
BC064916.1 AAH64916.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv469765 Chr.17:2213155 - 2400446 on Build GRCh38 Loss SNORD91B SMG6 MNT SGSM2 SRR TSR1 LOC101927864 LOC101927839 SNORD91A
nsv833336 Chr.17:2176922 - 2400456 on Build GRCh38 Loss SNORD91B SMG6 MNT SGSM2 SRR TSR1 LOC101927864 LOC101927839 SNORD91A

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