Hs06476488_cn

• Gene Symbol: LOC101927989
• Assay Reference Genome Location: Chr.18:76493823 on build GRCh38
• Cytoband: 18q23

Target Gene Details

• Entrez Gene ID: 101927989
• Gene Name: uncharacterized LOC101927989
• Gene Aliases: -
• Location: Chr.18:76491652-76493918 on Build GRCh38
• Assay Gene Location: Within Exon 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101927989	NR_136504.1	2	1105
	AW025577.1	1	107

Target Gene Details

• Entrez Gene ID: 9658
• Gene Name: zinc finger protein 516
• Gene Aliases: HsT287
• Location: Chr.18:76357682-76495255 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
ZNF516	NM_014643.3			NP_055458.1
	XM_011526273.2			XP_011524575.1
	XM_011526274.2			XP_011524576.1
	XM_017026097.1			XP_016881586.1
	D86975.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv6076n54	Chr.18:76476812 - 76521109 on Build GRCh38	Loss	ZNF516 LOC101927989 C18orf65
esv2717388	Chr.18:76288671 - 78160297 on Build GRCh38	Deletion	LINC00908 LOC107987260 MBP ZNF236 LOC101927989 C18orf65 LINC01029 LOC101927651 GALR1 ZNF516 LINC00683 LOC400661 LOC100131655
nsv458305	Chr.18:76484662 - 76521109 on Build GRCh38	Loss	ZNF516 LOC101927989 C18orf65
nsv828316	Chr.18:76379679 - 76528484 on Build GRCh38	Gain	ZNF516 LOC101927989 C18orf65
dgv1642n106	Chr.18:76492244 - 76495544 on Build GRCh38	Deletion	ZNF516 LOC101927989 C18orf65
nsv1064685	Chr.18:76490331 - 76542981 on Build GRCh38	Gain	LINC00908 ZNF516 LOC101927989 C18orf65
esv3643171	Chr.18:76440956 - 76611445 on Build GRCh38	Loss	LINC00908 ZNF516 LOC101927989 C18orf65
nsv1063632	Chr.18:76317786 - 77170410 on Build GRCh38	Gain	LINC00908 LOC101927651 ZNF516 LOC107987260 MBP ZNF236 LINC00683 LOC400661 LOC100131655 LOC101927989 C18orf65

More Information

• Set Membership: Intragenic, Exonic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

C2H2 zinc finger transcription factor

Gene Ontology Categories:

Process(es)

transcription from RNA polymerase II promoter
signal transduction
multicellular organism development
response to cold
positive regulation of transcription, DNA-templated
brown fat cell differentiation
adipose tissue development

Function(s)

core promoter proximal region sequence-specific DNA binding
transcription factor activity, sequence-specific DNA binding
activating transcription factor binding
sequence-specific DNA binding
transcription regulatory region DNA binding
metal ion binding