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See other THOC1 CNV Assays ›
Gene Symbol
THOC1
Assay Reference Genome
Location

Chr.18:243751 on build GRCh38
Cytoband
18p11.32
Assay ID Hs06501719_cn
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Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 9984

Gene Name:

 THO complex 1

Gene Aliases:

 HPR1, P84, P84N5

Location:

 Chr.18:214348-268059 on Build GRCh38

Assay Gene Location:

 Within Intron 13
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
THOC1 NM_005131.2 NP_005122.2
XM_011525772.2 XP_011524074.1
XM_011525773.1 XP_011524075.1
XM_011525774.2 XP_011524076.1
XM_017026103.1 XP_016881592.1
AK055354.1
AK225067.1
AK225709.1
AK314755.1
AY573303.1 AAT81409.1
BC010381.1 AAH10381.1
L36529.1 AAA53571.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv2174 Chr.18:240074 - 285087 on Build GRCh38 Deletion THOC1
dgv3303n100 Chr.18:219990 - 290812 on Build GRCh38 Gain THOC1
nsv576227 Chr.18:52933 - 322183 on Build GRCh38 Gain ROCK1P1 COLEC12 MIR8078 THOC1 USP14
esv3641475 Chr.18:153985 - 282924 on Build GRCh38 Gain THOC1 USP14
nsv518642 Chr.18:196829 - 331506 on Build GRCh38 Gain COLEC12 THOC1 USP14
nsv1064150 Chr.18:99036 - 321710 on Build GRCh38 Gain ROCK1P1 COLEC12 MIR8078 THOC1 USP14
dgv3301n100 Chr.18:11543 - 326679 on Build GRCh38 Gain ROCK1P1 COLEC12 MIR8078 THOC1 USP14
nsv1160503 Chr.18:200576 - 249255 on Build GRCh38 Duplication THOC1 USP14
nsv482935 Chr.18:10001 - 2900002 on Build GRCh38 Loss ENOSF1 LINC00470 LOC101926997 YES1 CLUL1 SMCHD1 ROCK1P1 LOC388456 TYMS METTL4 COLEC12 TYMSOS CETN1 MIR8078 CBX3P2 EMILIN2 NDC80 THOC1 USP14 ADCYAP1 LOC105376854
dgv3302n100 Chr.18:136228 - 249310 on Build GRCh38 Gain THOC1 USP14
esv3641473 Chr.18:128077 - 323706 on Build GRCh38 Gain COLEC12 THOC1 USP14
nsv576228 Chr.18:69836 - 1506323 on Build GRCh38 Loss ENOSF1 LINC00470 YES1 CLUL1 ROCK1P1 LOC388456 TYMS COLEC12 TYMSOS CETN1 MIR8078 THOC1 USP14 ADCYAP1 LOC105376854

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More Information


Additional Information:

For this assay, SNP(s) [rs117833456] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

Set Membership:

 Intragenic Intronic Non-exonic DGV Variation

Panther Classification:

Gene Ontology Categories:

Function(s) Process(es)


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