Hs06587090_cn

• Gene Symbol: AGBL4
• Assay Reference Genome Location: Chr.1:49376782 on build GRCh38
• Cytoband: 1p33

Target Gene Details

• Entrez Gene ID: 84871
• Gene Name: ATP/GTP binding protein like 4
• Gene Aliases: CCP6
• Location: Chr.1:48520157-50024011 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AGBL4	NM_001323573.1			NP_001310502.1
	NM_001323574.1			NP_001310503.1
	NM_001323575.1			NP_001310504.1
	NM_032785.3			NP_116174.3
	NR_136623.1
	XM_011542308.2			XP_011540610.1
	XM_011542310.2			XP_011540612.1
	XM_017002595.1			XP_016858084.1
	XM_017002596.1			XP_016858085.1
	XM_017002597.1			XP_016858086.1
	XM_017002598.1			XP_016858087.1
	AK094826.1
	AK294394.1
	AK294633.1
	AK296221.1

Target Gene Details

• Entrez Gene ID: 100874313
• Gene Name: AGBL4 intronic transcript 1
• Gene Aliases: -
• Location: Chr.1:49374201-49472085 on Build GRCh38
• Assay Gene Location: Within Intron 3

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
AGBL4-IT1	NR_046839.1
	AW071649.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3585992	Chr.1:49311509 - 49385380 on Build GRCh38	Loss	AGBL4 AGBL4-IT1
nsv546194	Chr.1:49097909 - 49583818 on Build GRCh38	Loss	AGBL4 AGBL4-IT1 LOC101929721
dgv162n100	Chr.1:49343719 - 49399068 on Build GRCh38	Loss	AGBL4 AGBL4-IT1
nsv1011949	Chr.1:49299766 - 49431310 on Build GRCh38	Loss	AGBL4 AGBL4-IT1
nsv546195	Chr.1:49238414 - 49388176 on Build GRCh38	Loss	AGBL4 AGBL4-IT1 LOC101929721
esv3585993	Chr.1:49352784 - 49378438 on Build GRCh38	Loss	AGBL4 AGBL4-IT1
nsv546196	Chr.1:49273041 - 49450176 on Build GRCh38	Loss	AGBL4 AGBL4-IT1
nsv1014234	Chr.1:49372335 - 49418415 on Build GRCh38	Loss	AGBL4 AGBL4-IT1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

metalloprotease

Gene Ontology Categories:

Process(es)

proteolysis
protein deglutamylation
C-terminal protein deglutamylation
protein side chain deglutamylation
defense response to virus

Function(s)

metallocarboxypeptidase activity
zinc ion binding
tubulin binding