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See other ATP2B2 CNV Assays ›
Gene Symbol
ATP2B2
Assay Reference Genome
Location

Chr.3:10626369 on build GRCh38
Cytoband
3p25.3
Assay ID Hs06633439_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 491

Gene Name:

 ATPase plasma membrane Ca2+ transporting 2

Gene Aliases:

 PMCA2, PMCA2a, PMCA2i

Location:

 Chr.3:10324023-10707962 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2B2 XM_005265179.4 XP_005265236.1
XM_006713175.3 XP_006713238.1
XM_017006481.1 XP_016861970.1
XM_017006484.1 XP_016861973.1
XM_017006487.1 XP_016861976.1
L20977.1 AAA50877.1

Target Gene Details

Entrez Gene ID:

 100874325

Gene Name:

 ATP2B2 intronic transcript 2

Gene Aliases:

 -

Location:

 Chr.3:10626015-10626807 on Build GRCh38

Assay Gene Location:

 Within Exon 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP2B2-IT2 NR_046766.1 2 159
AI126440.1 1 357
BX110985.1 2 180

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv436362 Chr.3:10048344 - 11860564 on Build GRCh38 Deletion SLC6A11 LOC101927467 IRAK2 BRK1 VGLL4 TAMM41 SLC6A1-AS1 HRH1 FANCD2 GHRLOS SEC13 TATDN2 ATP2B2-IT2 LINC00606 LINC00852 MIR885 ATP2B2 SLC6A1 MIR378B ATG7 VHL FANCD2OS GHRL
dgv762e201 Chr.3:10008967 - 11913136 on Build GRCh38 Deletion SLC6A11 IRAK2 VGLL4 TAMM41 CIDECP FANCD2 GHRLOS SEC13 TATDN2 LINC00852 MIR885 ATP2B2 SLC6A1 ATG7 GHRL LOC101927467 BRK1 SLC6A1-AS1 LOC401052 HRH1 ATP2B2-IT2 LINC00606 MIR378B EMC3 FANCD2P2 VHL FANCD2OS
nsv1121603 Chr.3:10071433 - 11889279 on Build GRCh38 Deletion SLC6A11 LOC101927467 IRAK2 BRK1 VGLL4 TAMM41 SLC6A1-AS1 HRH1 FANCD2 GHRLOS SEC13 TATDN2 ATP2B2-IT2 LINC00606 LINC00852 MIR885 ATP2B2 SLC6A1 MIR378B FANCD2P2 ATG7 VHL FANCD2OS GHRL
nsv436869 Chr.3:10064456 - 11877985 on Build GRCh38 Insertion SLC6A11 LOC101927467 IRAK2 BRK1 VGLL4 TAMM41 SLC6A1-AS1 HRH1 FANCD2 GHRLOS SEC13 TATDN2 ATP2B2-IT2 LINC00606 LINC00852 MIR885 ATP2B2 SLC6A1 MIR378B FANCD2P2 ATG7 VHL FANCD2OS GHRL
nsv1073204 Chr.3:9996548 - 11875005 on Build GRCh38 Deletion SLC6A11 IRAK2 VGLL4 TAMM41 CIDECP FANCD2 GHRLOS SEC13 TATDN2 LINC00852 MIR885 ATP2B2 SLC6A1 ATG7 GHRL LOC101927467 BRK1 SLC6A1-AS1 LOC401052 HRH1 ATP2B2-IT2 LINC00606 EMC3-AS1 MIR378B EMC3 FANCD2P2 VHL FANCD2OS

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