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See other TAP2 CNV Assays ›
Gene Symbol
TAP2
Assay Reference Genome
Location

Chr.6:32829854 on build GRCh38
Cytoband
6p21.32
Assay ID Hs06820332_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6891

Gene Name:

 transporter 2, ATP binding cassette subfamily B member

Gene Aliases:

 ABC18, ABCB3, APT2, D6S217E, PSF-2, PSF2, RING11

Location:

 Chr.6:32821833-32838823 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAP2 NM_000544.3 NP_000535.3
NM_001290043.1 NP_001276972.1
NM_018833.2 NP_061313.2
AB073779.1 BAB71769.1
AB208953.1 BAD92190.1
AF078671.1 AAD31384.1
AF105151.1 AAD12059.1
AF176984.1 AAD50509.1
AK222823.1 BAD96543.1
AK223300.1 BAD97020.1
AK225657.1
AK225693.1
AK292963.1
BT009906.1 AAP88908.1
FM246456.1
L09191.1 AAA58648.1
L09271.1
L10287.1 AAA58649.1
M74447.1 AAA59841.1
M84748.1
U07844.1 AAA79901.1
Z22935.1 CAA80522.1
Z22936.1 CAA80523.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion PBX2 NEU1 HLA-DRB5 HCP5 MIR5004 AGPAT1 PSMB8-AS1 NOTCH4 SLC39A7 MIR6833 TNF WDR46 PPP1R2P1 LY6G6E MIR1236 SNORD84 EHMT2 LOC100507547 ZBTB12 TAP2 BTNL2 HSPA1L LST1 HLA-DRA SLC44A4 LTB C6orf47 HLA-DMA BAG6 LOC101929163 SYNGAP1 HCG24 CYP21A1P MIR6873 AGER C4A HSPA1B CUTA SAPCD1 C4B RPS18 HLA-DPB1 VWA7 PPT2-EGFL8 ABHD16A COL11A2 GPANK1 TNXB PPT2 MIR219A1 DAXX CYP21A2 PSMB8 LSM2 LY6G5B RNF5 C6orf25 HLA-DQB2 SNORD117 PRRT1 EGFL8 HLA-DQB1-AS1 DDX39B TAPBP GPSM3 SNORA38 MCCD1 HLA-DQB1 TAP1 MICB STK19 DDX39B-AS1 HLA-DRB6 ATP6V1G2 RING1 NCR3 LTA KIFC1 ZBTB22 HSPA1A MIR4646 HCG26 C2 AIF1 MSH5 TNXA LY6G6D ATF6B RXRB PRRC2A DXO APOM LOC100287329 ATP6V1G2-DDX39B SAPCD1-AS1 CSNK2B C2-AS1 LY6G6C HCG23 RGL2 LOC100294145 SNORD52 PHF1 NFKBIL1 HLA-DOA LY6G6F CLIC1 MIR6832 CFB HLA-DPB2 BRD2 SKIV2L FKBPL HCG25 MIR6834 HLA-DRB1 HLA-DOB B3GALT4 C6orf10 DDAH2 HLA-DQA2 HSD17B8 LY6G5C MSH5-SAPCD1 HLA-DQA1 SNORD48 HLA-DMB ZBTB9 MIR3135B MIR6721 VPS52 VARS C6orf48 PFDN6 HLA-DPA1 NELFE LOC102725068 PSMB9
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion PBX2 NEU1 HLA-DRB5 HCP5 MIR5004 AGPAT1 PSMB8-AS1 NOTCH4 SLC39A7 MIR6833 TNF WDR46 PPP1R2P1 LY6G6E MIR1236 SNORD84 EHMT2 LOC100507547 ZBTB12 TAP2 BTNL2 HSPA1L LST1 HLA-DRA SLC44A4 LTB C6orf47 HLA-DMA BAG6 LOC101929163 SYNGAP1 HCG24 CYP21A1P MIR6873 AGER C4A HSPA1B CUTA SAPCD1 C4B RPS18 HLA-DPB1 VWA7 PPT2-EGFL8 ABHD16A COL11A2 GPANK1 TNXB PPT2 MIR219A1 DAXX CYP21A2 PSMB8 LSM2 LY6G5B RNF5 C6orf25 HLA-DQB2 SNORD117 PRRT1 EGFL8 HLA-DQB1-AS1 DDX39B TAPBP GPSM3 SNORA38 MCCD1 HLA-DQB1 TAP1 MICB STK19 DDX39B-AS1 HLA-DRB6 ATP6V1G2 RING1 NCR3 LTA KIFC1 ZBTB22 HSPA1A MIR4646 HCG26 C2 AIF1 MSH5 TNXA LY6G6D ATF6B RXRB PRRC2A DXO APOM LOC100287329 ATP6V1G2-DDX39B SAPCD1-AS1 CSNK2B C2-AS1 LY6G6C HCG23 RGL2 LOC100294145 SNORD52 PHF1 NFKBIL1 HLA-DOA LY6G6F CLIC1 MIR6832 CFB HLA-DPB2 BRD2 SKIV2L FKBPL HCG25 MIR6834 HLA-DRB1 HLA-DOB B3GALT4 C6orf10 DDAH2 HLA-DQA2 HSD17B8 LY6G5C MSH5-SAPCD1 HLA-DQA1 SNORD48 HLA-DMB ZBTB9 MIR3135B MIR6721 VPS52 VARS C6orf48 PFDN6 HLA-DPA1 NELFE LOC102725068 PSMB9
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion RING1 MIR5004 HLA-DPB2 BRD2 KIFC1 ZBTB22 CUTA PSMB8-AS1 RPS18 HCG25 MIR6834 HLA-DOB HLA-DPB1 B3GALT4 SLC39A7 COL11A2 HLA-DQA2 WDR46 PPP1R2P1 MIR219A1 DAXX HSD17B8 PSMB8 RXRB HLA-DQA1 TAP2 HLA-DMB HLA-DQB2 ZBTB9 MIR3135B VPS52 RGL2 LOC100294145 HLA-DQB1-AS1 PFDN6 TAPBP PHF1 HLA-DPA1 HLA-DMA SYNGAP1 HLA-DOA PSMB9 HCG24 HLA-DQB1 TAP1 MIR6873
nsv522573 Chr.6:32828908 - 32830506 on Build GRCh38 Loss TAP2
nsv830633 Chr.6:32829085 - 32995634 on Build GRCh38 Loss PSMB8-AS1 PSMB8 HLA-DMA TAP2 HLA-DMB PSMB9 PPP1R2P1 BRD2 TAP1 LOC100294145

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