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See other TAP2 CNV Assays ›
Gene Symbol
TAP2
Assay Reference Genome
Location

Chr.6:32829854 on build GRCh38
Cytoband
6p21.32
Assay ID Hs06820332_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 6891

Gene Name:

 transporter 2, ATP binding cassette subfamily B member

Gene Aliases:

 ABC18, ABCB3, APT2, D6S217E, PSF-2, PSF2, RING11

Location:

 Chr.6:32821833-32838823 on Build GRCh38

Assay Gene Location:

 Within Intron 10
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TAP2 NM_000544.3 NP_000535.3
NM_001290043.1 NP_001276972.1
NM_018833.2 NP_061313.2
AB073779.1 BAB71769.1
AB208953.1 BAD92190.1
AF078671.1 AAD31384.1
AF105151.1 AAD12059.1
AF176984.1 AAD50509.1
AK222823.1 BAD96543.1
AK223300.1 BAD97020.1
AK225657.1
AK225693.1
AK292963.1
BT009906.1 AAP88908.1
FM246456.1
L09191.1 AAA58648.1
L09271.1
L10287.1 AAA58649.1
M74447.1 AAA59841.1
M84748.1
U07844.1 AAA79901.1
Z22935.1 CAA80522.1
Z22936.1 CAA80523.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1073969 Chr.6:31456422 - 33480523 on Build GRCh38 Deletion TAPBP HLA-DQA1 VWA7 MIR4646 COL11A2 CYP21A2 MCCD1 HCG26 CSNK2B CUTA SNORD52 MIR219A1 MIR5004 RGL2 EGFL8 C6orf10 HCG25 LY6G6F CLIC1 TAP2 RNF5 ZBTB9 HCG23 DDX39B MSH5-SAPCD1 HLA-DQB1 LOC100507547 B3GALT4 DDX39B-AS1 MIR6834 SLC44A4 DDAH2 HLA-DPB2 AGPAT1 HSPA1A MIR3135B FKBPL C4B BRD2 PHF1 HLA-DQB1-AS1 LY6G5B SNORA38 LY6G6D NCR3 DAXX MIR6832 PPP1R2P1 DXO C6orf48 LTB HLA-DQB2 VARS ZBTB22 MSH5 HLA-DMB CYP21A1P HLA-DOB APOM BTNL2 SLC39A7 BAG6 SAPCD1-AS1 C6orf25 HLA-DRB1 PFDN6 MIR1236 LOC100294145 HSPA1B TNF CFB TNXB HLA-DOA RING1 HCP5 PPT2 HLA-DRA ABHD16A SAPCD1 KIFC1 ATP6V1G2-DDX39B C4A LST1 C6orf47 HCG24 AGER LOC100287329 NEU1 HLA-DPB1 SNORD117 SYNGAP1 SKIV2L TAP1 C2 SNORD48 HLA-DQA2 EHMT2 MIR6721 WDR46 LY6G5C PSMB8-AS1 ZBTB12 ATF6B LOC102725068 PRRT1 GPANK1 VPS52 MIR6873 LTA RXRB ATP6V1G2 LY6G6E AIF1 LSM2 GPSM3 MIR6833 STK19 PSMB9 C2-AS1 LOC101929163 MICB SNORD84 HLA-DPA1 LY6G6C PSMB8 TNXA NELFE HSPA1L NFKBIL1 HLA-DRB5 HLA-DMA HLA-DRB6 PRRC2A PBX2 RPS18 NOTCH4 PPT2-EGFL8 HSD17B8
nsv1112900 Chr.6:31455323 - 33480423 on Build GRCh38 Deletion TAPBP HLA-DQA1 VWA7 MIR4646 COL11A2 CYP21A2 MCCD1 HCG26 CSNK2B CUTA SNORD52 MIR219A1 MIR5004 RGL2 EGFL8 C6orf10 HCG25 LY6G6F CLIC1 TAP2 RNF5 ZBTB9 HCG23 DDX39B MSH5-SAPCD1 HLA-DQB1 LOC100507547 B3GALT4 DDX39B-AS1 MIR6834 SLC44A4 DDAH2 HLA-DPB2 AGPAT1 HSPA1A MIR3135B FKBPL C4B BRD2 PHF1 HLA-DQB1-AS1 LY6G5B SNORA38 LY6G6D NCR3 DAXX MIR6832 PPP1R2P1 DXO C6orf48 LTB HLA-DQB2 VARS ZBTB22 MSH5 HLA-DMB CYP21A1P HLA-DOB APOM BTNL2 SLC39A7 BAG6 SAPCD1-AS1 C6orf25 HLA-DRB1 PFDN6 MIR1236 LOC100294145 HSPA1B TNF CFB TNXB HLA-DOA RING1 HCP5 PPT2 HLA-DRA ABHD16A SAPCD1 KIFC1 ATP6V1G2-DDX39B C4A LST1 C6orf47 HCG24 AGER LOC100287329 NEU1 HLA-DPB1 SNORD117 SYNGAP1 SKIV2L TAP1 C2 SNORD48 HLA-DQA2 EHMT2 MIR6721 WDR46 LY6G5C PSMB8-AS1 ZBTB12 ATF6B LOC102725068 PRRT1 GPANK1 VPS52 MIR6873 LTA RXRB ATP6V1G2 LY6G6E AIF1 LSM2 GPSM3 MIR6833 STK19 PSMB9 C2-AS1 LOC101929163 MICB SNORD84 HLA-DPA1 LY6G6C PSMB8 TNXA NELFE HSPA1L NFKBIL1 HLA-DRB5 HLA-DMA HLA-DRB6 PRRC2A PBX2 RPS18 NOTCH4 PPT2-EGFL8 HSD17B8
nsv830633 Chr.6:32829085 - 32995634 on Build GRCh38 Loss TAP2 TAP1 HLA-DMB LOC100294145 HLA-DMA PPP1R2P1 PSMB8-AS1 BRD2 PSMB8 PSMB9
nsv522573 Chr.6:32828908 - 32830506 on Build GRCh38 Loss TAP2
nsv1119076 Chr.6:32595823 - 33480623 on Build GRCh38 Deletion VPS52 MIR6873 TAPBP HLA-DQA1 DAXX COL11A2 PPP1R2P1 HCG24 RXRB HLA-DQB2 CUTA MIR219A1 ZBTB22 HLA-DMB HLA-DPB1 MIR5004 HLA-DOB RGL2 SYNGAP1 SLC39A7 HCG25 PSMB9 TAP2 ZBTB9 PFDN6 TAP1 LOC100294145 HLA-DPA1 HLA-DQB1 B3GALT4 PSMB8 HLA-DQA2 MIR6834 HLA-DPB2 HLA-DOA RING1 MIR3135B HLA-DMA WDR46 PSMB8-AS1 RPS18 BRD2 PHF1 HLA-DQB1-AS1 HSD17B8 KIFC1

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