Hs06859677_cn

• Gene Symbol: LHX6
• Assay Reference Genome Location: Chr.9:122192631 on build GRCh38
• Cytoband: 9q33.2

Target Gene Details

• Entrez Gene ID: 26468
• Gene Name: LIM homeobox 6
• Gene Aliases: LHX6.1
• Location: Chr.9:122185626-122228893 on Build GRCh38
• Assay Gene Location: Within Intron 13

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LHX6	XM_011518521.2			XP_011516823.1
	XM_011518522.2			XP_011516824.1

Target Gene Details

• Entrez Gene ID: 254956
• Gene Name: MORN repeat containing 5
• Gene Aliases: C9orf113, C9orf18
• Location: Chr.9:122159661-122200088 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MORN5	NM_001286828.1			NP_001273757.1
	NM_198469.3			NP_940871.2
	XM_005251878.3			XP_005251935.1
	XM_011518458.1			XP_011516760.1
	AI026684.1
	AI560944.1
	AK128877.1			BAC87653.1
	BC133690.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv831715	Chr.9:122066612 - 122226720 on Build GRCh38	Gain	MIR4478 TTLL11 MORN5 NDUFA8 LHX6

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

helix-turn-helix transcription factor, homeodomain transcription factor, DNA-binding transcription factor, gene-specific transcriptional regulator

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
cerebral cortex radially oriented cell migration
cerebral cortex tangential migration
cerebral cortex GABAergic interneuron migration
cell maturation

Function(s)

transcription factor activity, sequence-specific DNA binding
protein binding
zinc ion binding
sequence-specific DNA binding