Hs07037073_cn

• Gene Symbol: GPC6
• Assay Reference Genome Location: Chr.13:93227999 on build GRCh38
• Cytoband: 13q31.3

Target Gene Details

• Entrez Gene ID: 10082
• Gene Name: glypican 6
• Gene Aliases: OMIMD1
• Location: Chr.13:93226825-94408020 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
GPC6	NM_005708.3			NP_005699.1
	AF105267.1			AAD55749.1
	AF111178.1			AAD31392.1
	AK074741.1
	AK130013.1
	AK290144.1
	AK304338.1
	AY358462.1			AAQ88827.1
	BC106947.2			AAI06948.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3582694	Chr.13:91877905 - 93587318 on Build GRCh38	Gain	LINC00363 GPC6 MIR548AS GPC5 GPC5-AS2 GPC5-AS1
esv3892424	Chr.13:92937463 - 94196357 on Build GRCh38	Gain	LINC00363 GPC6 GPC6-AS2 GPC6-AS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

retinoid metabolic process
glycosaminoglycan biosynthetic process
glycosaminoglycan catabolic process
cell migration
glycosaminoglycan metabolic process
Wnt signaling pathway, planar cell polarity pathway

Function(s)

heparan sulfate proteoglycan binding
coreceptor activity involved in Wnt signaling pathway, planar cell polarity pathway