Genomic Map
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Target Gene Details
Entrez Gene ID: | 51062 |
Gene Name: | atlastin GTPase 1 |
Gene Aliases: |
AD-FSP, FSP1, GBP3, HSN1D, SPG3, SPG3A, atlastin1 |
Location: |
Chr.14:50533082-50633068 on Build GRCh38 |
Assay Gene Location: | Overlaps - Exon 1 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ATL1 | NM_001127713.1 | NP_001121185.1 | ||
| DA397302.1 | 1 | 63 |
Target Gene Details
Entrez Gene ID: | 11183 |
Gene Name: | mitogen-activated protein kinase kinase kinase kinase 5 |
Gene Aliases: |
GCKR, KHS, KHS1, MAPKKKK5 |
Location: |
Chr.14:50418493-50561126 on Build GRCh38 |
Assay Gene Location: | Within Intron 2 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| MAP4K5 | XM_011536378.2 | XP_011534680.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv1039493 | Chr.14:50476979 - 50687775 on Build GRCh38 | Gain |
 MAP4K5
SAV1
ATL1
|
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Additional Information:
For this assay, SNP(s) [rs145962477] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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