Hs07122018_cn

• Gene Symbol: SUGP2
• Assay Reference Genome Location: Chr.19:18991898 on build GRCh38
• Cytoband: 19p13.11

Target Gene Details

• Entrez Gene ID: 10147
• Gene Name: SURP and G-patch domain containing 2
• Gene Aliases: SFRS14
• Location: Chr.19:18990887-19034052 on Build GRCh38
• Assay Gene Location: Within Exon 12

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SUGP2	NM_001017392.4	11	5238	NP_001017392.2
	NM_001321697.1			NP_001308626.1
	NM_001321698.1			NP_001308627.1
	NM_001321699.1	11	5186	NP_001308628.1
	NM_014884.4			NP_055699.2
	XM_017026137.1	11	5394	XP_016881626.1
	AF518874.1			AAN77117.1
	AI039052.1
	AK025508.1	2	1411
	AK291275.1
	AL832488.1			CAI46117.1
	BC020586.1			AAH20586.1
	CR627095.1	3	1695	CAI46255.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833778	Chr.19:18901860 - 19090678 on Build GRCh38	Loss	HOMER3 LOC102724360 ARMC6 SLC25A42 SUGP2 DDX49 COPE
nsv1151217	Chr.19:18627369 - 19284914 on Build GRCh38	Deletion	HAPLN4 HOMER3 UPF1 ARMC6 BORCS8-MEF2B SUGP1 TM6SF2 SUGP2 DDX49 NR2C2AP TMEM161A CRTC1 COPE BORCS8 CERS1 RFXANK NCAN KLHL26 LOC102724360 MEF2B SLC25A42 GDF1 COMP
nsv2435	Chr.19:18966623 - 19011770 on Build GRCh38	Deletion	SUGP2

More Information

Additional Information:

For this assay, SNP(s) [rs116321480] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA metabolism protein, RNA processing factor, RNA splicing factor, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

mRNA processing
RNA splicing

Function(s)

poly(A) RNA binding