Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 9138 |
Gene Name: | Rho guanine nucleotide exchange factor 1 |
Gene Aliases: |
GEF1, LBCL2, LSC, P115-RHOGEF, SUB1.5 |
Location: |
Chr.19:41883200-41907454 on Build GRCh38 |
Assay Gene Location: | Within Intron 17 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ARHGEF1 | NM_004706.3 | NP_004697.2 | ||
| NM_198977.1 | NP_945328.1 | |||
| NM_199002.1 | NP_945353.1 | |||
| XM_005259386.4 | XP_005259443.1 | |||
| XM_005259390.4 | XP_005259447.1 | |||
| XM_011527468.2 | XP_011525770.1 | |||
| AL832294.1 | ||||
| BC005155.2 | AAH05155.2 | |||
| BC011726.2 | AAH11726.1 | |||
| BC034013.1 | AAH34013.2 | |||
| BC035127.1 | AAH35127.1 | |||
| BC067262.1 | AAH67262.1 | |||
| BT007421.1 | AAP36089.1 | |||
| U64105.1 | AAB17896.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv520239 | Chr.19:41853387 - 42426852 on Build GRCh38 | Loss |
 LIPE-AS1
ARHGEF1
PAFAH1B3
LOC390937
GSK3A
ZNF526
DEDD2
RPS19
ZNF574
CD79A
ERF
GRIK5
ATP1A3
MIR8077
MIR6797
LOC100505622
RABAC1
MEGF8
CIC
LOC100505585
LIPE
MIR4323
PRR19
CNFN
LOC101930071
TMEM145
POU2F2
|
| nsv579625 | Chr.19:41896804 - 41902357 on Build GRCh38 | Loss |
ARHGEF1
|
| nsv953580 | Chr.19:41888230 - 41997948 on Build GRCh38 | Deletion |
RABAC1
ARHGEF1
LOC100505585
ATP1A3
LOC390937
|
| nsv522854 | Chr.19:41613927 - 42426852 on Build GRCh38 | Gain |
LIPE-AS1
ARHGEF1
PAFAH1B3
LOC390937
GSK3A
LYPD4
ZNF526
CEACAM5
DEDD2
RPS19
ZNF574
CEACAM3
CD79A
ERF
GRIK5
ATP1A3
DMRTC2
MIR8077
CEACAM4
MIR6797
LOC100505622
RABAC1
MEGF8
CIC
LOC100505585
LIPE
CEACAM6
MIR4323
CEACAM7
PRR19
CNFN
LOC101930071
TMEM145
POU2F2
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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