Genomic Map
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Target Gene Details
Entrez Gene ID: | 6829 |
Gene Name: | SPT5 homolog, DSIF elongation factor subunit |
Gene Aliases: |
SPT5, SPT5H, Tat-CT1 |
Location: |
Chr.19:39445546-39476670 on Build GRCh38 |
Assay Gene Location: | Within Intron 10 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SUPT5H | NM_001111020.2 | NP_001104490.1 | ||
| NM_001130824.1 | NP_001124296.1 | |||
| NM_001130825.1 | NP_001124297.1 | |||
| NM_001319990.1 | NP_001306919.1 | |||
| NM_001319991.1 | NP_001306920.1 | |||
| NM_003169.3 | NP_003160.2 | |||
| XM_017027174.1 | XP_016882663.1 | |||
| AB000516.1 | BAA24075.1 | |||
| AB209257.1 | BAD92494.1 | |||
| AF040253.1 | AAD02179.1 | |||
| AK296117.1 | ||||
| AK302954.1 | ||||
| AK303480.1 | ||||
| BC024203.2 | AAH24203.1 | |||
| U56402.1 | AAC51102.1 | |||
| Y12790.1 | CAA73326.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv523856 | Chr.19:39422918 - 39506832 on Build GRCh38 | Loss |
 SUPT5H
PLEKHG2
RPS16
DLL3
TIMM50
LOC723805
|
| nsv953573 | Chr.19:39444461 - 39522960 on Build GRCh38 | Deletion |
SUPT5H
DLL3
TIMM50
SELV
|
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Additional Information:
For this assay, SNP(s) [rs74911223] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Gene Ontology Categories:
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