Hs07124193_cn

• Gene Symbol: PDCD5
• Assay Reference Genome Location: Chr.19:32587126 on build GRCh38
• Cytoband: 19q13.11

Target Gene Details

• Entrez Gene ID: 9141
• Gene Name: programmed cell death 5
• Gene Aliases: TFAR19
• Location: Chr.19:32581161-32587452 on Build GRCh38
• Assay Gene Location: Within Exon 4

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
PDCD5	NM_004708.3			NP_004699.1
	XM_005259392.4	4	1578	XP_005259449.1
	AB209040.1	3	4950	BAD92277.1
	AF014955.1			AAD11579.1
	AK124774.1	1	3169
	BC015519.2			AAH15519.1
	BM696336.1
	BT006694.1			AAP35340.1
	CR456934.1			CAG33215.1
	DN915905.1
	DQ208400.1			ABA60375.1
	N40187.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv519794	Chr.19:32585709 - 32594595 on Build GRCh38	Gain	PDCD5

More Information

Additional Information:

For this assay, SNP(s) [rs78232320] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Exonic, DGV Variation

Panther Classification:

Molecular Function -

protein-binding activity modulator

Gene Ontology Categories:

Process(es)

apoptotic process
negative regulation of cell proliferation
positive regulation of gene expression
positive regulation of apoptotic process
positive regulation of cysteine-type endopeptidase activity involved in apoptotic process
cellular response to transforming growth factor beta stimulus
positive regulation of release of cytochrome c from mitochondria
positive regulation of protein import into mitochondrial outer membrane
negative regulation of chaperone-mediated protein folding

Function(s)

DNA binding
protein binding
heparin binding
acetyltransferase activator activity
beta-tubulin binding