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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54107715 on build GRCh38
Cytoband
19q13.42
Assay ID Hs07124344_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 NP_001308721.1
NM_013342.3 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 AAD45182.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1
BQ027375.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion PRPF31 OSCAR VSTM1 TARM1 TFPT NDUFA3
nsv1056177 Chr.19:54073048 - 54112306 on Build GRCh38 Gain OSCAR TARM1 TFPT NDUFA3
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss PRPF31 TMC4 TFPT NDUFA3 MBOAT7 CNOT3 LENG1
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion PRPF31 TMC4 OSCAR TFPT TSEN34 NDUFA3 MBOAT7 CNOT3 LENG1
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion VN1R4 MIR518F MIR498 CACNG6 FAM90A27P MBOAT7 MIR518A2 PRPF31 MIR526A2 OSCAR BIRC8 MIR4752 MIR520H LILRB2 MIR519B LOC105372457 MIR1323 VSTM1 MIR516B1 VN1R2 TSEN34 ZNF525 MIR525 ZNF813 MIR512-2 NDUFA3 MIR523 MIR517B MIR371A MIR520B MIR521-1 MIR522 NLRP12 RPS9 MIR518C MIR519D MIR526B MIR524 MIR1283-1 DPRX CACNG8 MIR520G MIR516A2 ZNF765 LENG1 MIR518B MIR516B2 MIR520F MIR516A1 MYADM MIR519A1 TFPT TPM3P9 CACNG7 MIR519E MIR521-2 MIR520A MIR518D MIR527 TMC4 MIR515-1 MIR519C MIR520D MIR1283-2 MIR520E PRKCG LILRB5 MIR518E ZNF331 ZNF677 MIR520C ZNF818P TARM1 MIR372 LOC284379 ZNF665 MIR517C MIR371B CNOT3 MIR512-1 MIR515-2 LILRA6 MIR526A1 ZNF761 ZNF845 MIR935 MIR518A1 LILRB3 MIR373 MIR517A LILRA5 MIR519A2
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss PRPF31 OSCAR TARM1 TFPT NDUFA3
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss PRPF31 OSCAR MIR935 VSTM1 TARM1 TFPT CACNG6 NDUFA3 CACNG8
esv3893246 Chr.19:54081109 - 54111207 on Build GRCh38 Gain OSCAR TARM1 TFPT NDUFA3

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