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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54107715 on build GRCh38
Cytoband
19q13.42
Assay ID Hs07124344_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Intron 6
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 NP_001308721.1
NM_013342.3 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 AAD45182.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1
BQ027375.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1056177 Chr.19:54073048 - 54112306 on Build GRCh38 Gain TFPT OSCAR NDUFA3 TARM1
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion TFPT OSCAR NDUFA3 PRPF31 TARM1 VSTM1
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss LENG1 TFPT NDUFA3 MBOAT7 PRPF31 CNOT3 TMC4
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion LENG1 TFPT OSCAR NDUFA3 MBOAT7 PRPF31 CNOT3 TMC4 TSEN34
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR522 MIR1283-1 DPRX MIR935 MIR516A2 MIR517C MIR520G MIR371A VSTM1 MIR521-1 MIR516B1 MIR373 TSEN34 MIR516B2 LENG1 MIR518D PRPF31 CACNG6 PRKCG MIR518A1 MIR371B MIR516A1 LILRB5 VN1R2 MIR518F MIR520F LOC105372457 FAM90A27P LOC284379 MIR518B ZNF765 CNOT3 MIR519A2 ZNF813 MIR498 RPS9 MIR520B MIR1283-2 NDUFA3 ZNF818P MIR1323 TMC4 MIR512-2 MIR519E MIR512-1 MIR518E ZNF525 MYADM MIR519B CACNG7 TARM1 MIR520H MIR519A1 MIR372 MIR523 MIR4752 MIR518A2 MIR525 ZNF665 MIR517A VN1R4 CACNG8 MIR520C MIR526A2 NLRP12 MBOAT7 MIR520A MIR515-1 MIR521-2 MIR519D LILRB3 MIR527 MIR518C BIRC8 MIR517B ZNF845 MIR520E ZNF677 MIR520D ZNF761 TPM3P9 TFPT OSCAR ZNF331 MIR526A1 MIR515-2 LILRA5 LILRA6 LILRB2 MIR524 MIR526B MIR519C
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss TFPT OSCAR NDUFA3 PRPF31 TARM1
esv3893246 Chr.19:54081109 - 54111207 on Build GRCh38 Gain TFPT OSCAR NDUFA3 TARM1
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss TFPT OSCAR NDUFA3 PRPF31 MIR935 CACNG6 TARM1 VSTM1 CACNG8

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