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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54111060 on build GRCh38
Cytoband
19q13.42
Assay ID Hs07125426_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 NP_001308721.1
NM_013342.3 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 AAD45182.1
AK310627.1
AK310647.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion PRPF31 VSTM1 NDUFA3 TFPT TARM1 OSCAR
nsv1056177 Chr.19:54073048 - 54112306 on Build GRCh38 Gain NDUFA3 TFPT TARM1 OSCAR
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss TMC4 PRPF31 LENG1 NDUFA3 CNOT3 TFPT MBOAT7
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion TMC4 PRPF31 TSEN34 LENG1 NDUFA3 CNOT3 TFPT OSCAR MBOAT7
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion ZNF818P MIR517C NDUFA3 TFPT MIR516B2 MIR516A1 MIR524 TARM1 MIR517B MIR521-2 MIR520B MIR520E VSTM1 MIR520D MIR520H MBOAT7 MIR519A2 MIR1283-1 LILRB2 MIR518B MIR521-1 LILRA6 MIR526B MIR519C LILRA5 MIR518C MIR517A MIR371A LILRB3 MIR498 MIR519D PRPF31 MIR4752 MIR515-1 MIR515-2 MIR516A2 DPRX MIR518D MIR516B1 MIR526A1 MIR522 MIR372 MIR527 ZNF665 MIR520C MIR526A2 ZNF765 VN1R4 LENG1 CACNG7 MIR519B LOC105372457 OSCAR MIR1323 PRKCG MIR519E MIR373 MIR520A MIR935 FAM90A27P MIR1283-2 TMC4 LOC284379 MIR518A1 MIR518A2 MIR520G RPS9 MIR518E CNOT3 BIRC8 MIR523 ZNF813 MIR518F LILRB5 ZNF845 ZNF525 CACNG6 TSEN34 NLRP12 MYADM TPM3P9 MIR371B ZNF331 MIR525 ZNF761 ZNF677 CACNG8 VN1R2 MIR512-2 MIR520F MIR512-1 MIR519A1
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss PRPF31 NDUFA3 TFPT TARM1 OSCAR
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss PRPF31 VSTM1 CACNG6 NDUFA3 TFPT TARM1 OSCAR CACNG8 MIR935
esv3893246 Chr.19:54081109 - 54111207 on Build GRCh38 Gain NDUFA3 TFPT TARM1 OSCAR

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