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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54111060 on build GRCh38
Cytoband
19q13.42
Assay ID Hs07125426_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 NP_001308721.1
NM_013342.3 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 AAD45182.1
AK310627.1
AK310647.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv1056177 Chr.19:54073048 - 54112306 on Build GRCh38 Gain TARM1 OSCAR TFPT NDUFA3
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion VSTM1 TARM1 OSCAR PRPF31 TFPT NDUFA3
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss MBOAT7 PRPF31 TFPT LENG1 CNOT3 NDUFA3 TMC4
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion TSEN34 OSCAR MBOAT7 PRPF31 TFPT LENG1 CNOT3 NDUFA3 TMC4
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR1283-2 MIR524 MIR523 ZNF813 MIR518A2 NLRP12 MYADM MIR519B MIR372 MIR498 MIR522 MIR518D MIR520C MIR520F ZNF845 MIR525 ZNF818P TFPT LENG1 MIR518B VN1R2 MIR521-1 MIR512-2 MIR520E MIR516A1 MIR517C TSEN34 CACNG6 MIR1323 TARM1 MIR516B2 NDUFA3 MIR516A2 MIR373 LOC105372457 LILRB5 MIR526B LILRA6 PRPF31 LILRB2 MIR371A MIR519A1 MIR517B VSTM1 MIR518A1 OSCAR FAM90A27P ZNF665 MIR519D MIR519E MIR520A MIR520H MIR512-1 MIR4752 MIR521-2 MBOAT7 MIR515-1 LILRB3 MIR518F CNOT3 MIR520G MIR519C TMC4 TPM3P9 MIR518E MIR1283-1 LOC284379 ZNF677 PRKCG ZNF331 MIR517A MIR515-2 MIR935 BIRC8 DPRX CACNG7 MIR519A2 ZNF761 MIR516B1 MIR520B VN1R4 MIR526A2 MIR527 LILRA5 RPS9 MIR520D MIR526A1 CACNG8 ZNF765 MIR518C ZNF525 MIR371B
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss TARM1 OSCAR PRPF31 TFPT NDUFA3
esv3893246 Chr.19:54081109 - 54111207 on Build GRCh38 Gain TARM1 OSCAR TFPT NDUFA3
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss CACNG6 VSTM1 TARM1 OSCAR PRPF31 MIR935 TFPT NDUFA3 CACNG8

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