Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 9138 |
Gene Name: | Rho guanine nucleotide exchange factor 1 |
Gene Aliases: |
GEF1, LBCL2, LSC, P115-RHOGEF, SUB1.5 |
Location: |
Chr.19:41883200-41907454 on Build GRCh38 |
Assay Gene Location: | Within Intron 17 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ARHGEF1 | NM_004706.3 | NP_004697.2 | ||
| NM_198977.1 | NP_945328.1 | |||
| NM_199002.1 | NP_945353.1 | |||
| XM_005259386.4 | XP_005259443.1 | |||
| XM_005259390.4 | XP_005259447.1 | |||
| XM_011527468.2 | XP_011525770.1 | |||
| AL832294.1 | ||||
| BC005155.2 | AAH05155.2 | |||
| BC011726.2 | AAH11726.1 | |||
| BC034013.1 | AAH34013.2 | |||
| BC035127.1 | AAH35127.1 | |||
| BC067262.1 | AAH67262.1 | |||
| BT007421.1 | AAP36089.1 | |||
| U64105.1 | AAB17896.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv520239 | Chr.19:41853387 - 42426852 on Build GRCh38 | Loss |
 GSK3A
RABAC1
ATP1A3
ERF
LOC390937
ARHGEF1
MEGF8
ZNF526
MIR4323
DEDD2
CD79A
PAFAH1B3
POU2F2
RPS19
MIR6797
LIPE
LOC100505622
LOC101930071
TMEM145
CIC
CNFN
LOC100505585
ZNF574
LIPE-AS1
MIR8077
GRIK5
PRR19
|
| nsv579625 | Chr.19:41896804 - 41902357 on Build GRCh38 | Loss |
ARHGEF1
|
| nsv953580 | Chr.19:41888230 - 41997948 on Build GRCh38 | Deletion |
RABAC1
ATP1A3
LOC390937
ARHGEF1
LOC100505585
|
| nsv522854 | Chr.19:41613927 - 42426852 on Build GRCh38 | Gain |
GSK3A
CEACAM3
RABAC1
ATP1A3
ERF
LOC390937
ARHGEF1
CEACAM5
MEGF8
ZNF526
MIR4323
DEDD2
CEACAM7
CD79A
PAFAH1B3
DMRTC2
POU2F2
RPS19
MIR6797
LYPD4
LIPE
LOC100505622
LOC101930071
TMEM145
CIC
CNFN
LOC100505585
ZNF574
LIPE-AS1
CEACAM4
MIR8077
GRIK5
PRR19
CEACAM6
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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