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See other TFPT CNV Assays ›
Gene Symbol
TFPT
Assay Reference Genome
Location

Chr.19:54114186 on build GRCh38
Cytoband
19q13.42
Assay ID Hs07145224_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 29844

Gene Name:

 TCF3 fusion partner

Gene Aliases:

 FB1, INO80F, amida

Location:

 Chr.19:54107013-54115675 on Build GRCh38

Assay Gene Location:

 Within Intron 3
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
TFPT NM_001321792.1 NP_001308721.1
NM_013342.3 NP_037474.1
XM_005278261.1 XP_005278318.1
AF052052.1 AAD45182.1
AK310627.1
AK310647.1
BC004281.1 AAH04281.1
BC007776.2 AAH07776.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv510773 Chr.19:54017180 - 54132236 on Build GRCh38 Deletion VSTM1 OSCAR TFPT TARM1 NDUFA3 PRPF31
nsv515623 Chr.19:54102901 - 54179150 on Build GRCh38 Loss MBOAT7 TMC4 CNOT3 TFPT LENG1 NDUFA3 PRPF31
nsv953613 Chr.19:54097214 - 54198733 on Build GRCh38 Deletion MBOAT7 TMC4 CNOT3 OSCAR TFPT LENG1 TSEN34 NDUFA3 PRPF31
esv2718812 Chr.19:53184636 - 54322450 on Build GRCh38 Deletion MIR1283-1 MIR517B MIR516B2 ZNF761 NDUFA3 MIR516B1 MIR520A FAM90A27P MYADM MIR519A2 LILRA5 MIR520B MIR498 MIR519C CACNG8 MIR519B MIR524 MIR520D MIR512-2 MIR518D DPRX MIR512-1 MIR517A ZNF665 BIRC8 RPS9 MIR371A MIR520C PRKCG CACNG6 CNOT3 VN1R2 TFPT LILRB3 MIR518A2 TSEN34 TARM1 MIR515-2 MIR527 MIR515-1 MIR520F TPM3P9 MIR519D MIR520G MIR526A2 MIR526B LOC105372457 MIR4752 MIR518B LILRA6 MIR520E MIR516A2 MIR526A1 MIR1323 MIR518C ZNF677 MIR520H MIR518E MIR521-1 LILRB2 MBOAT7 MIR1283-2 TMC4 MIR521-2 MIR523 ZNF331 MIR372 ZNF813 VSTM1 OSCAR MIR518A1 LENG1 ZNF525 VN1R4 MIR519E ZNF818P MIR517C MIR522 MIR519A1 MIR371B NLRP12 LILRB5 MIR373 MIR935 LOC284379 MIR516A1 CACNG7 ZNF845 MIR518F MIR525 ZNF765 PRPF31
nsv470157 Chr.19:54063999 - 54127773 on Build GRCh38 Loss OSCAR TFPT TARM1 NDUFA3 PRPF31
nsv833877 Chr.19:53951529 - 54117323 on Build GRCh38 Loss MIR935 VSTM1 OSCAR TFPT CACNG8 TARM1 NDUFA3 PRPF31 CACNG6

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