Genomic Map
Back To TopAssay Details
Target Gene Details
Entrez Gene ID: | 9138 |
Gene Name: | Rho guanine nucleotide exchange factor 1 |
Gene Aliases: |
GEF1, LBCL2, LSC, P115-RHOGEF, SUB1.5 |
Location: |
Chr.19:41883200-41907454 on Build GRCh38 |
Assay Gene Location: | Within Intron 17 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| ARHGEF1 | NM_004706.3 | NP_004697.2 | ||
| NM_198977.1 | NP_945328.1 | |||
| NM_199002.1 | NP_945353.1 | |||
| XM_005259386.4 | XP_005259443.1 | |||
| XM_005259390.4 | XP_005259447.1 | |||
| XM_011527468.2 | XP_011525770.1 | |||
| AL832294.1 | ||||
| BC005155.2 | AAH05155.2 | |||
| BC011726.2 | AAH11726.1 | |||
| BC034013.1 | AAH34013.2 | |||
| BC035127.1 | AAH35127.1 | |||
| BC067262.1 | AAH67262.1 | |||
| BT007421.1 | AAP36089.1 | |||
| U64105.1 | AAB17896.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| nsv520239 | Chr.19:41853387 - 42426852 on Build GRCh38 | Loss |
 GSK3A
ARHGEF1
MIR8077
ATP1A3
ERF
PAFAH1B3
ZNF526
LOC101930071
LIPE
POU2F2
LOC100505622
RABAC1
ZNF574
CIC
DEDD2
MEGF8
TMEM145
MIR4323
RPS19
CD79A
MIR6797
LOC100505585
GRIK5
LOC390937
PRR19
CNFN
LIPE-AS1
|
| nsv579625 | Chr.19:41896804 - 41902357 on Build GRCh38 | Loss |
ARHGEF1
|
| nsv953580 | Chr.19:41888230 - 41997948 on Build GRCh38 | Deletion |
RABAC1
ARHGEF1
LOC100505585
LOC390937
ATP1A3
|
| nsv522854 | Chr.19:41613927 - 42426852 on Build GRCh38 | Gain |
GSK3A
CEACAM4
ARHGEF1
CEACAM7
MIR8077
ATP1A3
ERF
PAFAH1B3
CEACAM5
ZNF526
LOC101930071
DMRTC2
LIPE
POU2F2
LOC100505622
CEACAM6
CEACAM3
RABAC1
ZNF574
CIC
DEDD2
MEGF8
TMEM145
MIR4323
RPS19
CD79A
MIR6797
LOC100505585
GRIK5
LOC390937
PRR19
LYPD4
CNFN
LIPE-AS1
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
Gene Ontology Categories:
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