Hs07174235_cn

• Gene Symbol: HM13
• Assay Reference Genome Location: Chr.20:31523860 on build GRCh38
• Cytoband: 20q11.21

Target Gene Details

• Entrez Gene ID: 81502
• Gene Name: histocompatibility minor 13
• Gene Aliases: H13, IMP1, IMPAS, IMPAS-1, MSTP086, PSENL3, PSL3, SPP, SPPL1
• Location: Chr.20:31514410-31569567 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HM13	NM_030789.3			NP_110416.1
	NM_178580.2			NP_848695.1
	NM_178581.2			NP_848696.1
	NM_178582.2			NP_848697.1
	AF172086.1			AAQ13609.1
	AF483215.1			AAM22076.1
	AF515663.1			AAN77099.1
	AJ345029.1			CAC87790.1
	AJ420895.1			CAD13132.1
	AK074686.1			BAC11138.1
	AK075283.1			BAC11519.1
	AK314410.1
	AY169310.1			AAO12535.1
	AY169311.1			AAO12536.1
	AY169312.1			AAO12537.1
	BC008938.2			AAH08938.1
	BC008959.2			AAH08959.1
	BC062595.1			AAH62595.1
	BI192962.1
	BI552780.1
	DA087240.1
	DQ168450.1
	HY026569.1
	KU178790.1
	KU178791.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470546	Chr.20:31245806 - 31647499 on Build GRCh38	Gain	ID1 REM1 DEFB124 LINC00028 DEFB122 DEFB121 HM13-AS1 DEFB116 DEFB119 HM13 LOC107985416 COX4I2 DEFB117 DEFB115 DEFB123 DEFB118 MIR3193
dgv4300n100	Chr.20:31247234 - 32033468 on Build GRCh38	Gain	ID1 REM1 DEFB124 LINC00028 DEFB122 DEFB119 LOC107985416 COX4I2 DEFB117 DEFB115 BCL2L1 PDRG1 DEFB118 MIR3193 TPX2 DEFB121 CCM2L HM13-AS1 DEFB116 TTLL9 FOXS1 HM13 ABALON DUSP15 MYLK2 DEFB123 XKR7
esv2763228	Chr.20:31247246 - 31651719 on Build GRCh38	Gain	ID1 REM1 DEFB124 LINC00028 DEFB122 DEFB121 HM13-AS1 DEFB116 DEFB119 HM13 LOC107985416 COX4I2 DEFB117 DEFB115 DEFB123 DEFB118 MIR3193
esv3645652	Chr.20:31500710 - 31576564 on Build GRCh38	Gain	HM13 LOC107985416 HM13-AS1
nsv585911	Chr.20:31305698 - 31688103 on Build GRCh38	Gain	ID1 REM1 DEFB124 LINC00028 DEFB122 DEFB121 HM13-AS1 DEFB116 DEFB119 HM13 LOC107985416 COX4I2 DEFB117 BCL2L1 DEFB123 DEFB118 MIR3193

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

aspartic protease

Gene Ontology Categories:

Process(es)

signal peptide processing
membrane protein ectodomain proteolysis
membrane protein intracellular domain proteolysis
membrane protein proteolysis
protein homotetramerization
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol

Function(s)

protein binding
peptidase activity
ubiquitin protein ligase binding
aspartic endopeptidase activity, intramembrane cleaving
protein homodimerization activity