Hs07206890_cn

• Gene Symbol: HM13
• Assay Reference Genome Location: Chr.20:31517676 on build GRCh38
• Cytoband: 20q11.21

Target Gene Details

• Entrez Gene ID: 81502
• Gene Name: histocompatibility minor 13
• Gene Aliases: H13, IMP1, IMPAS, IMPAS-1, MSTP086, PSENL3, PSL3, SPP, SPPL1
• Location: Chr.20:31514410-31569567 on Build GRCh38
• Assay Gene Location: Within Intron 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
HM13	NM_030789.3			NP_110416.1
	NM_178580.2			NP_848695.1
	NM_178581.2			NP_848696.1
	NM_178582.2			NP_848697.1
	AF172086.1			AAQ13609.1
	AF483215.1			AAM22076.1
	AF515663.1			AAN77099.1
	AJ345029.1			CAC87790.1
	AJ420895.1			CAD13132.1
	AK074686.1			BAC11138.1
	AK075283.1			BAC11519.1
	AK314410.1
	AY169310.1			AAO12535.1
	AY169311.1			AAO12536.1
	AY169312.1			AAO12537.1
	BC008938.2			AAH08938.1
	BC008959.2			AAH08959.1
	BC062595.1			AAH62595.1
	BI192962.1
	BI552780.1
	DA087240.1
	DQ168450.1
	HY026569.1
	KU178790.1
	KU178791.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470546	Chr.20:31245806 - 31647499 on Build GRCh38	Gain	DEFB116 ID1 DEFB119 DEFB115 DEFB124 LOC107985416 DEFB122 DEFB117 REM1 DEFB121 MIR3193 HM13-AS1 DEFB123 LINC00028 DEFB118 COX4I2 HM13
esv2763228	Chr.20:31247246 - 31651719 on Build GRCh38	Gain	DEFB116 ID1 DEFB119 DEFB115 DEFB124 LOC107985416 DEFB122 DEFB117 REM1 DEFB121 MIR3193 HM13-AS1 DEFB123 LINC00028 DEFB118 COX4I2 HM13
dgv4300n100	Chr.20:31247234 - 32033468 on Build GRCh38	Gain	TTLL9 DUSP15 XKR7 DEFB119 CCM2L DEFB122 DEFB117 MYLK2 DEFB121 MIR3193 COX4I2 PDRG1 HM13 DEFB116 ID1 BCL2L1 DEFB115 DEFB124 LOC107985416 REM1 ABALON HM13-AS1 DEFB123 TPX2 LINC00028 DEFB118 FOXS1
esv3645652	Chr.20:31500710 - 31576564 on Build GRCh38	Gain	HM13-AS1 LOC107985416 HM13
nsv458961	Chr.20:31305698 - 31688103 on Build GRCh38	Gain	DEFB116 ID1 DEFB119 BCL2L1 DEFB124 LOC107985416 DEFB122 DEFB117 REM1 DEFB121 MIR3193 HM13-AS1 DEFB123 LINC00028 DEFB118 COX4I2 HM13

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

aspartic protease

Gene Ontology Categories:

Process(es)

signal peptide processing
membrane protein ectodomain proteolysis
membrane protein intracellular domain proteolysis
membrane protein proteolysis
protein homotetramerization
membrane protein proteolysis involved in retrograde protein transport, ER to cytosol

Function(s)

protein binding
peptidase activity
ubiquitin protein ligase binding
aspartic endopeptidase activity, intramembrane cleaving
protein homodimerization activity