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See other ATP6V0C CNV Assays ›
Gene Symbol
ATP6V0C
Assay Reference Genome
Location

Chr.16:2517280 on build GRCh38
Cytoband
16p13.3
Assay ID Hs07401361_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 527

Gene Name:

 ATPase H+ transporting V0 subunit c

Gene Aliases:

 ATP6C, ATP6L, ATPL, VATL, VPPC, Vma3

Location:

 Chr.16:2513726-2520223 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP6V0C NM_001198569.1 NP_001185498.1
NM_001694.3 NP_001685.1
AW161158.1
BC004537.2 AAH04537.1
BC007389.2 AAH07389.1
BC007759.2 AAH07759.1
BC009290.2 AAH09290.1
BI548787.1
BT007155.1 AAP35819.1
CR541930.1 CAG46728.1
CR541951.1 CAG46749.1
M62762.1 AAA60039.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication WFIKKN1 IGFALS LOC105371046 MIR6768 TPSG1 AXIN1 ZNF598 RNF151 MIR3176 NME3 GNG13 TSR3 LOC105371049 FAM173A ATP6V0C RGS11 FBXL16 MIR1225 BRICD5 MIR5587 LUC7L SSTR5-AS1 LOC729652 NDUFB10 CRAMP1 JMJD8 NUBP2 TSC2 CASKIN1 TPSB2 PDIA2 PRSS27 NTN3 NOXO1 LOC105371047 NHLRC4 RHBDF1 TELO2 SNRNP25 HAGHL SSTR5 MIR6511B1 CCDC78 TMEM8A HS3ST6 PRR35 MIR3180-5 LINC00235 MIR4516 NPW POLR3K LOC105371045 METRN LOC100134368 LOC106660606 LOC652276 PRR25 PGP MRPS34 HBA2 MIR3677 METTL26 LOC107987233 LOC107984876 LMF1 SNORA10 MIR662 CHTF18 HAGH TPSD1 SNHG9 STUB1 SLC9A3R2 SOX8 RHOT2 RNPS1 PRSS29P GFER PDPK1 TPSAB1 RAB26 RPL23AP5 TMEM204 RAB11FIP3 LOC101929280 NPRL3 MIR3177 PTX4 MIR6767 MSRB1 CCDC154 MIR4717 UBE2I SPSB3 BAIAP3 GNPTG HBZ CLCN7 AMDHD2 LINC00254 LOC100287175 NME4 MAPK8IP3 DDX11L10 UNKL ARHGDIG FAHD1 MRPL28 HN1L SNHG19 MEIOB SYNGR3 MCRIP2 HBQ1 CAPN15 SNORD60 EME2 CEMP1 KCTD5 DECR2 SNORA64 FLJ42627 MPG C1QTNF8 E4F1 CCNF RAB40C RPUSD1 HBA1 ABCA17P TBL3 RPS2 PKD1 HBM PIGQ MLST8 SNORA78 RHBDL1 C16orf59 FAM234A NTHL1 WDR90 ECI1 WDR24 RPL3L TRAF7 DNASE1L2 MSLN ERVK13-1 WASIR2 LMF1-AS1 MIR3178 LOC105371038 LOC105371184 MIR6859-4 NARFL CACNA1H ABCA3 MIR940 IFT140 C16orf91 TBC1D24
esv2760067 Chr.16:2486824 - 2820535 on Build GRCh38 Gain+Loss TCEB2 ERVK13-1 PRSS21 PRSS33 MIR3178 LOC652276 SRRM2-AS1 SRRM2 PRSS27 AMDHD2 CEMP1 KCTD5 ATP6V0C PDPK1 PRSS41 FLJ42627 TBC1D24
nsv833122 Chr.16:2501717 - 2663937 on Build GRCh38 Loss LOC652276 AMDHD2 CEMP1 ATP6V0C PDPK1 ERVK13-1 FLJ42627 TBC1D24 MIR3178
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain E4F1 MIR6511B1 CCNF ABCA17P MIR6767 MIR3180-5 MIR6768 MIR4717 MIR4516 PKD1 MLST8 LOC106660606 LOC652276 C16orf59 AMDHD2 PGP LOC105371049 ATP6V0C MIR1225 ECI1 MIR3677 TRAF7 DNASE1L2 BRICD5 SNHG19 LOC729652 MIR3178 TSC2 RNPS1 CASKIN1 SNORD60 CEMP1 ABCA3 NTN3 PDPK1 RAB26 MIR940 TBC1D24
nsv833121 Chr.16:2360975 - 2518228 on Build GRCh38 Loss CCNF C16orf59 ABCA17P MIR6767 LOC729652 ATP6V0C MIR6768 NTN3 TBC1D24

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