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See other ATP6V0C CNV Assays ›
Gene Symbol
ATP6V0C
Assay Reference Genome
Location

Chr.16:2517111 on build GRCh38
Cytoband
16p13.3
Assay ID Hs07401716_cn
Size
Availability Made To Order
Catalog # 4400291
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Assay Details

Target Gene Details

Entrez Gene ID:

 527

Gene Name:

 ATPase H+ transporting V0 subunit c

Gene Aliases:

 ATP6C, ATP6L, ATPL, VATL, VPPC, Vma3

Location:

 Chr.16:2513726-2520223 on Build GRCh38

Assay Gene Location:

 Within Intron 2
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
ATP6V0C NM_001198569.1 NP_001185498.1
NM_001694.3 NP_001685.1
AW161158.1
BC004537.2 AAH04537.1
BC007389.2 AAH07389.1
BC007759.2 AAH07759.1
BC009290.2 AAH09290.1
BI548787.1
BT007155.1 AAP35819.1
CR541930.1 CAG46728.1
CR541951.1 CAG46749.1
M62762.1 AAA60039.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
esv2422427 Chr.16:10001 - 2723164 on Build GRCh38 Duplication PDIA2 DDX11L10 SNORD60 LINC00254 MRPL28 DNASE1L2 BAIAP3 JMJD8 LOC107987233 TPSAB1 LOC100134368 LOC652276 HBA2 MEIOB TSC2 ABCA17P E4F1 NTN3 CASKIN1 CCDC154 ECI1 MIR940 MIR3180-5 HBM HS3ST6 LUC7L CACNA1H MIR3176 NHLRC4 LMF1 TBC1D24 MRPS34 PGP IGFALS NME3 RAB11FIP3 RAB40C CLCN7 MIR3178 C1QTNF8 LOC729652 NOXO1 RPL3L ZNF598 LOC101929280 NUBP2 RNF151 FBXL16 FLJ42627 SLC9A3R2 WDR24 SYNGR3 TPSG1 ABCA3 RGS11 CCDC78 RHOT2 LOC105371046 WASIR2 SNHG19 PRR25 MIR4717 CAPN15 LOC107984876 CHTF18 MPG GNG13 BRICD5 ARHGDIG RPS2 PDPK1 HAGHL LOC105371045 HBQ1 LINC00235 WFIKKN1 MIR3177 NDUFB10 SNHG9 PRR35 LOC105371184 UNKL SNORA64 STUB1 MSLN TRAF7 HN1L FAM173A RPL23AP5 MIR6511B1 UBE2I RNPS1 ERVK13-1 POLR3K MIR662 LOC105371038 SSTR5 TELO2 LOC106660606 TPSB2 LOC105371047 C16orf91 RPUSD1 MIR6767 LOC105371049 MIR4516 HBA1 TSR3 MIR1225 MIR6859-4 NARFL SNORA10 IFT140 KCTD5 METTL26 SSTR5-AS1 HBZ NPW PKD1 SNRNP25 EME2 TBL3 NME4 TMEM8A NPRL3 GNPTG GFER CCNF FAM234A ATP6V0C MCRIP2 AMDHD2 NTHL1 MSRB1 HAGH METRN CEMP1 CRAMP1 LOC100287175 SPSB3 MIR3677 MIR6768 RHBDL1 C16orf59 PTX4 PRSS29P RHBDF1 TPSD1 SOX8 RAB26 WDR90 TMEM204 MLST8 MIR5587 PIGQ MAPK8IP3 LMF1-AS1 SNORA78 AXIN1 FAHD1 PRSS27 DECR2
esv2760067 Chr.16:2486824 - 2820535 on Build GRCh38 Gain+Loss TCEB2 FLJ42627 ATP6V0C AMDHD2 KCTD5 PRSS21 SRRM2-AS1 PDPK1 CEMP1 ERVK13-1 TBC1D24 PRSS41 LOC652276 PRSS27 MIR3178 SRRM2 PRSS33
nsv833122 Chr.16:2501717 - 2663937 on Build GRCh38 Loss PDPK1 CEMP1 ERVK13-1 TBC1D24 FLJ42627 ATP6V0C AMDHD2 LOC652276 MIR3178
nsv1052260 Chr.16:2074546 - 2629655 on Build GRCh38 Gain CCNF SNORD60 TRAF7 ATP6V0C AMDHD2 DNASE1L2 ABCA3 MIR6511B1 RNPS1 CEMP1 MIR3677 LOC106660606 MIR6768 C16orf59 LOC652276 SNHG19 TSC2 ABCA17P E4F1 MIR6767 LOC105371049 NTN3 CASKIN1 MIR4516 RAB26 MIR4717 ECI1 MIR1225 MIR940 MIR3180-5 MLST8 BRICD5 PDPK1 PKD1 TBC1D24 PGP MIR3178 LOC729652
nsv833121 Chr.16:2360975 - 2518228 on Build GRCh38 Loss CCNF MIR6767 NTN3 TBC1D24 ATP6V0C MIR6768 C16orf59 LOC729652 ABCA17P

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