Name: [Hs07536687_cn] [ARHGEF1]
Creator: Thermo Fisher Scientific
Keywords: [ARHGEF1] Assay, [Rho guanine nucleotide exchange factor 1] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	9138
Gene Name:	Rho guanine nucleotide exchange factor 1
Gene Aliases:	GEF1, LBCL2, LSC, P115-RHOGEF, SUB1.5
Location:	Chr.19:41883200-41907454 on Build GRCh38
Assay Gene Location:	Overlaps Exon 14 - Intron 14

Gene Symbol	Transcript Accession	Protein ID
ARHGEF1	NM_004706.3	NP_004697.2
	NM_198977.1	NP_945328.1
	NM_199002.1	NP_945353.1
	XM_005259386.4	XP_005259443.1
	XM_005259390.4	XP_005259447.1
	XM_011527468.2	XP_011525770.1
	AL832294.1
	BC005155.2	AAH05155.2
	BC011726.2	AAH11726.1
	BC034013.1	AAH34013.2
	BC067262.1	AAH67262.1
	BT007421.1	AAP36089.1
	U64105.1	AAB17896.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv520239	Chr.19:41853387 - 42426852 on Build GRCh38	Loss	MEGF8 POU2F2 GRIK5 LOC100505585 MIR6797 ZNF574 LOC101930071 TMEM145 RABAC1 LIPE-AS1 GSK3A PAFAH1B3 MIR4323 LOC390937 LIPE CD79A MIR8077 ERF ATP1A3 ARHGEF1 RPS19 ZNF526 CNFN DEDD2 CIC LOC100505622 PRR19
nsv579616	Chr.19:41896562 - 41897164 on Build GRCh38	Gain	ARHGEF1
nsv953580	Chr.19:41888230 - 41997948 on Build GRCh38	Deletion	LOC390937 RABAC1 ATP1A3 LOC100505585 ARHGEF1
esv2718586	Chr.19:41896514 - 41896999 on Build GRCh38	Deletion	ARHGEF1
nsv820680	Chr.19:41896269 - 41897228 on Build GRCh38	Deletion	ARHGEF1
nsv522854	Chr.19:41613927 - 42426852 on Build GRCh38	Gain	LYPD4 MEGF8 POU2F2 DMRTC2 GRIK5 LOC100505585 MIR6797 ZNF574 LOC101930071 TMEM145 RABAC1 CEACAM5 LIPE-AS1 GSK3A PAFAH1B3 MIR4323 LOC390937 LIPE CEACAM4 CD79A MIR8077 ERF CEACAM7 ATP1A3 ARHGEF1 CEACAM6 RPS19 ZNF526 CNFN DEDD2 CIC LOC100505622 CEACAM3 PRR19