Name: [Hs07536687_cn] [ARHGEF1]
Creator: Thermo Fisher Scientific
Keywords: [ARHGEF1] Assay, [Rho guanine nucleotide exchange factor 1] Assay

Genomic Map

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Assay Details

Target Gene Details

Entrez Gene ID:	9138
Gene Name:	Rho guanine nucleotide exchange factor 1
Gene Aliases:	GEF1, LBCL2, LSC, P115-RHOGEF, SUB1.5
Location:	Chr.19:41883200-41907454 on Build GRCh38
Assay Gene Location:	Overlaps Exon 14 - Intron 14

Gene Symbol	Transcript Accession	Protein ID
ARHGEF1	NM_004706.3	NP_004697.2
	NM_198977.1	NP_945328.1
	NM_199002.1	NP_945353.1
	XM_005259386.4	XP_005259443.1
	XM_005259390.4	XP_005259447.1
	XM_011527468.2	XP_011525770.1
	AL832294.1
	BC005155.2	AAH05155.2
	BC011726.2	AAH11726.1
	BC034013.1	AAH34013.2
	BC067262.1	AAH67262.1
	BT007421.1	AAP36089.1
	U64105.1	AAB17896.1

Target Copy Number Variation Details

DGV Version:

Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv520239	Chr.19:41853387 - 42426852 on Build GRCh38	Loss	MIR8077 MEGF8 ATP1A3 GRIK5 LIPE-AS1 LOC101930071 LOC100505585 PAFAH1B3 CIC TMEM145 CD79A DEDD2 LOC390937 RPS19 MIR6797 LIPE POU2F2 ZNF526 CNFN GSK3A LOC100505622 MIR4323 ARHGEF1 ERF PRR19 ZNF574 RABAC1
nsv579616	Chr.19:41896562 - 41897164 on Build GRCh38	Gain	ARHGEF1
nsv953580	Chr.19:41888230 - 41997948 on Build GRCh38	Deletion	LOC390937 ARHGEF1 ATP1A3 LOC100505585 RABAC1
esv2718586	Chr.19:41896514 - 41896999 on Build GRCh38	Deletion	ARHGEF1
nsv522854	Chr.19:41613927 - 42426852 on Build GRCh38	Gain	MIR8077 DMRTC2 CEACAM7 MEGF8 ATP1A3 GRIK5 LIPE-AS1 LOC101930071 LOC100505585 CEACAM3 PAFAH1B3 CIC TMEM145 CD79A DEDD2 LOC390937 RPS19 MIR6797 LIPE POU2F2 ZNF526 CNFN GSK3A CEACAM6 LOC100505622 CEACAM5 MIR4323 CEACAM4 ARHGEF1 LYPD4 ERF PRR19 ZNF574 RABAC1
esv22227	Chr.19:41896269 - 41897228 on Build GRCh38	Loss	ARHGEF1