Hs07536925_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48033922 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1
	BQ185108.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	BSPH1 LIG1 CABP5 PLA2G4C ELSPBP1 C19orf68 PLA2G4C-AS1
esv25290	Chr.19:48033510 - 48034030 on Build GRCh38	Loss	CABP5
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	SIGLEC16 GFY SNORD35B SNAR-C5 LOC105447645 RASIP1 MIR6799 LOC105372430 TRPM4 BCL2L12 SNAR-A6 SNORD33 SYNGR4 CGB1 HRC C19orf68 AKT1S1 PIH1D1 CABP5 SNAR-A8 TEAD2 SNAR-C1 SLC17A7 SPHK2 SNAR-A2 NTF4 PRMT1 GYS1 PRRG2 FUT2 MIR5088 ELSPBP1 PTOV1-AS2 RCN3 DHDH LIN7B SNORD32A BCAT2 LOC101059948 RPL18 SEC1P PTOV1 NTN5 PNKP SNAR-C4 CPT1C IL4I1 RRAS ZNF473 SNAR-A14 VRK3 CYTH2 DBP SNAR-G1 MIR4324 NOSIP SNAR-A10 SCAF1 CCDC155 SNORD34 NUCB1 SULT2B1 SNRNP70 KDELR1 GRWD1 FUT1 SNAR-A4 PRR12 LHB FLJ26850 FUZ CA11 FTL TSKS LOC101928295 MIR4750 SNAR-A3 FGF21 EMP3 SIGLEC11 CGB2 IZUMO1 RPS11 FLT3LG MIR6800 SNORD35A ALDH16A1 NUP62 PPP1R15A AP2A1 SNAR-G2 SPACA4 SLC6A16 TBC1D17 TULP2 KCNA7 PLEKHA4 CARD8 CGB3 TMEM143 SNAR-A11 CGB7 ZNF114 MIR150 RUVBL2 MED25 SNAR-B1 SNAR-D NUCB1-AS1 DKKL1 FCGRT PPFIA3 SNAR-A5 HSD17B14 PTOV1-AS1 KCNJ14 MAMSTR C19orf73 MIR4749 LIG1 SNAR-B2 ATF5 PLA2G4C SNAR-A12 SNAR-C3 LMTK3 CGB8 SNAR-C2 PLA2G4C-AS1 PTH2 LOC100287477 RPL13A IRF3 FAM83E CCDC114 SNAR-A1 CGB5 SNAR-A13 GRIN2D BSPH1 BAX MIR6798 CD37 CARD8-AS1 ADM5 SNAR-A7 MIR4751 SNAR-A9
dgv3610n100	Chr.19:48024325 - 48062810 on Build GRCh38	Gain	CABP5 PLA2G4C ELSPBP1 PLA2G4C-AS1
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CABP5 CCDC114 CARD8 TMEM143 GRIN2D ZNF114 KDELR1 LIG1 PLA2G4C EMP3 CARD8-AS1 ELSPBP1 SYNGR4 C19orf68 PLA2G4C-AS1
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	CABP5 PLA2G4C ELSPBP1 PLA2G4C-AS1
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	TPRX1 SULT2A1 CABP5 CRX SNAR-C1 SNAR-A1 LINC01595 SNAR-C5 SNAR-C4 SNAR-A13 BSPH1 SNAR-A2 SNAR-A3 SNAR-A12 ELSPBP1 SNAR-C3 SNAR-C2
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	CABP5 PLA2G4C ELSPBP1 PLA2G4C-AS1
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	TPRX1 SULT2A1 CABP5 CRX SNAR-C1 SNAR-A1 LINC01595 SNAR-C5 SNAR-C4 SNAR-A13 BSPH1 SNAR-A2 SNAR-A3 PLA2G4C SNAR-A12 ELSPBP1 SNAR-C3 SNAR-C2 PLA2G4C-AS1

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding