Hs07536925_cn

• Gene Symbol: CABP5
• Assay Reference Genome Location: Chr.19:48033922 on build GRCh38
• Cytoband: 19q13.33

Target Gene Details

• Entrez Gene ID: 56344
• Gene Name: calcium binding protein 5
• Gene Aliases: CABP3
• Location: Chr.19:48029383-48048342 on Build GRCh38
• Assay Gene Location: Within Intron 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
CABP5	NM_019855.4			NP_062829.1
	XM_017026992.1			XP_016882481.1
	AF169159.1			AAF25793.1
	BC126133.1
	BC126135.1
	BQ185108.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv833853	Chr.19:47982539 - 48184317 on Build GRCh38	Loss	PLA2G4C-AS1 LIG1 BSPH1 PLA2G4C C19orf68 ELSPBP1 CABP5
nsv9739	Chr.19:47901840 - 50143063 on Build GRCh38	Gain+Loss	HRC CGB5 FLT3LG SNAR-C2 FCGRT C19orf68 LMTK3 FGF21 ZNF473 SNAR-A6 PTOV1 SNAR-A13 SNAR-C3 SNAR-A7 SEC1P TMEM143 GRWD1 SCAF1 FLJ26850 IZUMO1 CARD8-AS1 CCDC155 TULP2 PTOV1-AS2 MAMSTR LIN7B BAX IL4I1 CA11 CGB8 TRPM4 FUT2 SNAR-A8 MIR6800 MIR4750 SNAR-C5 SIGLEC11 NUP62 HSD17B14 LOC101059948 SNAR-A5 PRMT1 SNAR-C1 SNAR-D SNORD32A LOC105372430 C19orf73 PLA2G4C-AS1 CGB1 SPACA4 PRRG2 GRIN2D SNAR-A1 GYS1 GFY MIR4749 TEAD2 LHB PLA2G4C DHDH SNAR-B1 FTL SNAR-A2 CD37 SNORD35B SLC17A7 AKT1S1 PPFIA3 SYNGR4 DKKL1 RCN3 RPS11 SLC6A16 PRR12 MIR6798 LOC100287477 CGB2 BSPH1 SNRNP70 ZNF114 SNAR-G1 NTN5 RRAS KCNJ14 CGB7 MIR6799 SNORD35A SNAR-A10 AP2A1 ALDH16A1 FUZ PIH1D1 ELSPBP1 KCNA7 CGB3 CPT1C PTOV1-AS1 CCDC114 SNAR-B2 MIR5088 TSKS LOC105447645 LOC101928295 SNAR-A14 SNAR-A3 CABP5 MIR4751 PTH2 PPP1R15A RPL18 CARD8 SIGLEC16 SULT2B1 SNAR-A11 PNKP ATF5 NUCB1-AS1 EMP3 CYTH2 RUVBL2 NUCB1 RASIP1 SNAR-A12 PLEKHA4 SNORD33 NOSIP ADM5 FAM83E MIR4324 SNAR-A4 IRF3 TBC1D17 SNAR-G2 KDELR1 SNAR-C4 MED25 FUT1 LIG1 NTF4 RPL13A SNAR-A9 DBP VRK3 BCAT2 MIR150 SPHK2 BCL2L12 SNORD34
esv25290	Chr.19:48033510 - 48034030 on Build GRCh38	Loss	CABP5
esv34181	Chr.19:48009377 - 48416682 on Build GRCh38	Loss	CARD8-AS1 PLA2G4C SYNGR4 C19orf68 ZNF114 CARD8 ELSPBP1 KDELR1 PLA2G4C-AS1 LIG1 CCDC114 EMP3 GRIN2D TMEM143 CABP5
dgv3611n100	Chr.19:48024325 - 48081406 on Build GRCh38	Gain	PLA2G4C-AS1 PLA2G4C ELSPBP1 CABP5
nsv1058785	Chr.19:48004749 - 48075632 on Build GRCh38	Gain	PLA2G4C-AS1 PLA2G4C ELSPBP1 CABP5
nsv428367	Chr.19:47788899 - 48039659 on Build GRCh38	Gain+Loss	BSPH1 SNAR-A2 SNAR-C1 SNAR-C2 LINC01595 ELSPBP1 SNAR-C4 SNAR-A13 SNAR-C3 TPRX1 SNAR-C5 SNAR-A1 SNAR-A12 CRX SNAR-A3 SULT2A1 CABP5
esv3893228	Chr.19:48002211 - 48072851 on Build GRCh38	Loss	PLA2G4C-AS1 PLA2G4C ELSPBP1 CABP5
dgv3612n100	Chr.19:48027173 - 48037765 on Build GRCh38	Gain	CABP5
nsv579901	Chr.19:48033582 - 48046691 on Build GRCh38	Loss	CABP5
nsv1058622	Chr.19:47798576 - 48077885 on Build GRCh38	Gain	BSPH1 PLA2G4C SNAR-A2 SNAR-C1 SNAR-C2 LINC01595 ELSPBP1 SNAR-C4 PLA2G4C-AS1 SNAR-A13 SNAR-C3 TPRX1 SNAR-C5 SNAR-A1 SNAR-A12 CRX SNAR-A3 SULT2A1 CABP5

More Information

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation

Gene Ontology Categories:

Process(es)

signal transduction

Function(s)

calcium ion binding
protein binding