Hs07544125_cn

• Gene Symbol: LOC100288152
• Assay Reference Genome Location: Chr.5:473369 on build GRCh38
• Cytoband: 5p15.33

Target Gene Details

• Entrez Gene ID: 100288152
• Gene Name: uncharacterized LOC100288152
• Gene Aliases: -
• Location: Chr.5:473236-480892 on Build GRCh38
• Assay Gene Location: Within Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC100288152	NR_125375.1	1	134
	BI222796.1	1	134

Target Gene Details

• Entrez Gene ID: 6550
• Gene Name: solute carrier family 9 member A3
• Gene Aliases: DIAR8, NHE-3, NHE3
• Location: Chr.5:471986-524434 on Build GRCh38
• Assay Gene Location: Overlaps Intron 16 - Exon 17

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
SLC9A3	NM_001284351.2			NP_001271280.1
	NM_004174.3			NP_004165.2
	BC101669.1			AAI01670.1
	BC101671.1			AAI01672.1
	BC143328.1
	U28043.1			AAB48990.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
esv3894107	Chr.5:81322 - 801057 on Build GRCh38	Gain	PDCD6 TPPP PP7080 CCDC127 SLC9A3 LOC100996325 SDHA CEP72 LRRC14B PLEKHG4B MIR4456 ZDHHC11B EXOC3 LOC100288152 LOC101929895 AHRR ZDHHC11 HRAT5 EXOC3-AS1
nsv822926	Chr.5:471229 - 543871 on Build GRCh38	Gain	MIR4456 PP7080 EXOC3 LOC100288152 SLC9A3
nsv830183	Chr.5:349237 - 502409 on Build GRCh38	Gain+Loss	PP7080 EXOC3 LOC100288152 SLC9A3 AHRR EXOC3-AS1
esv22420	Chr.5:472164 - 473774 on Build GRCh38	Loss	PP7080 LOC100288152 SLC9A3
esv3603747	Chr.5:453680 - 475646 on Build GRCh38	Loss	PP7080 EXOC3 LOC100288152 SLC9A3
dgv9484n54	Chr.5:467509 - 474821 on Build GRCh38	Gain	PP7080 EXOC3 LOC100288152 SLC9A3
nsv1032584	Chr.5:375290 - 809679 on Build GRCh38	Gain	TPPP PP7080 SLC9A3 LOC100996325 CEP72 MIR4456 ZDHHC11B EXOC3 LOC100288152 LOC101929895 AHRR ZDHHC11 EXOC3-AS1
nsv461889	Chr.5:429874 - 598109 on Build GRCh38	Gain	MIR4456 PP7080 EXOC3 LOC100288152 SLC9A3 AHRR EXOC3-AS1
nsv527666	Chr.5:457146 - 490122 on Build GRCh38	Loss	PP7080 EXOC3 LOC100288152 SLC9A3
dgv9479n54	Chr.5:438449 - 567131 on Build GRCh38	Gain	MIR4456 PP7080 EXOC3 LOC100288152 SLC9A3 EXOC3-AS1
dgv9487n54	Chr.5:472193 - 473702 on Build GRCh38	Loss	PP7080 LOC100288152 SLC9A3
esv2759315	Chr.5:17263 - 595840 on Build GRCh38	Loss	PDCD6 PP7080 CCDC127 SLC9A3 SDHA LRRC14B PLEKHG4B MIR4456 EXOC3 LOC100288152 AHRR HRAT5 EXOC3-AS1
dgv9490n54	Chr.5:473253 - 474507 on Build GRCh38	Loss	LOC100288152 SLC9A3
nsv596655	Chr.5:467561 - 474770 on Build GRCh38	Loss	PP7080 EXOC3 LOC100288152 SLC9A3
esv3603744	Chr.5:359572 - 478120 on Build GRCh38	Gain	PP7080 EXOC3 LOC100288152 SLC9A3 AHRR EXOC3-AS1
dgv9489n54	Chr.5:472511 - 473374 on Build GRCh38	Loss	PP7080 LOC100288152 SLC9A3
nsv4674	Chr.5:454921 - 488099 on Build GRCh38	Insertion	PP7080 EXOC3 LOC100288152 SLC9A3
nsv1027279	Chr.5:337575 - 531110 on Build GRCh38	Gain	PP7080 EXOC3 LOC100288152 SLC9A3 AHRR EXOC3-AS1
nsv1019215	Chr.5:346521 - 661696 on Build GRCh38	Gain	LOC100996325 TPPP CEP72 MIR4456 PP7080 EXOC3 LOC100288152 SLC9A3 AHRR EXOC3-AS1
esv2752071	Chr.5:378298 - 699075 on Build GRCh38	Gain	LOC100996325 TPPP CEP72 MIR4456 PP7080 EXOC3 LOC100288152 LOC101929895 SLC9A3 AHRR EXOC3-AS1

More Information

• Set Membership: Intragenic, Exonic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

transporter, secondary carrier transporter

Gene Ontology Categories:

Process(es)

regulation of sodium ion transport
ion transport
receptor-mediated endocytosis
circadian rhythm
response to glucocorticoid
regulation of intracellular pH
potassium ion transmembrane transport
sodium ion import across plasma membrane
hydrogen ion transmembrane transport

Function(s)

protein binding
sodium:proton antiporter activity
potassium:proton antiporter activity
PDZ domain binding