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See other COL18A1 CNV Assays ›
Gene Symbol
COL18A1
Assay Reference Genome
Location

Chr.21:45505946 on build GRCh38
Cytoband
21q22.3
Assay ID Hs01150362_cn
Size
Availability Made To Order
Catalog # 4400291
Price
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Assay Details

Target Gene Details

Entrez Gene ID:

 80781

Gene Name:

 collagen type XVIII alpha 1 chain

Gene Aliases:

 KNO, KNO1, KS

Location:

 Chr.21:45405137-45513720 on Build GRCh38

Assay Gene Location:

 Overlaps Exon 38 - Intron 38
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
COL18A1 NM_030582.3 NP_085059.2
NM_130444.2 NP_569711.2
NM_130445.3 NP_569712.2
AF018081.1 AAC39658.1
AF018082.1 AAC39659.1
AK130835.1
BC033715.1 AAH33715.1
BC063833.1 AAH63833.1
L22548.1 AAA51864.1

Target Gene Details

Entrez Gene ID:

 6573

Gene Name:

 solute carrier family 19 member 1

Gene Aliases:

 CHMD, FOLT, IFC1, REFC, RFC1

Location:

 Chr.21:45502517-45563143 on Build GRCh38

Assay Gene Location:

 Within Intron 16
Gene Symbol Transcript Accession Exon Location Assay Transcript Location Protein ID
SLC19A1 XM_017028445.1 XP_016883934.1
AB209069.1 BAD92306.1
AK310797.1

Target Copy Number Variation Details

DGV Version:

 Release date: 2016-05-15, GRCh GRCh38
Target
Variation		 Location CNV
Subtype		 Genes
nsv516407 Chr.21:45410958 - 45620742 on Build GRCh38 Loss MIR6815 COL18A1 SLC19A1 COL18A1-AS1 LOC105372840
esv2762114 Chr.21:45260287 - 45647830 on Build GRCh38 Gain LOC642852 MIR6815 LINC00316 COL18A1 SLC19A1 LINC00205 LOC107985476 COL18A1-AS2 COL18A1-AS1 LOC105372840 POFUT2
dgv7903n54 Chr.21:45496498 - 45540367 on Build GRCh38 Loss COL18A1 SLC19A1
nsv953653 Chr.21:45409686 - 45560386 on Build GRCh38 Deletion MIR6815 COL18A1 SLC19A1 COL18A1-AS2 COL18A1-AS1
dgv4438n100 Chr.21:45462733 - 45559862 on Build GRCh38 Gain MIR6815 COL18A1 SLC19A1
esv3893419 Chr.21:45463239 - 45625553 on Build GRCh38 Gain MIR6815 COL18A1 SLC19A1 LOC105372840
dgv4436n100 Chr.21:45402338 - 45556768 on Build GRCh38 Gain MIR6815 COL18A1 SLC19A1 COL18A1-AS2 COL18A1-AS1
nsv834112 Chr.21:45502237 - 45628339 on Build GRCh38 Gain COL18A1 SLC19A1 LOC105372840
nsv459308 Chr.21:45495128 - 45517044 on Build GRCh38 Loss COL18A1 SLC19A1
dgv4437n100 Chr.21:45453955 - 45546266 on Build GRCh38 Gain MIR6815 COL18A1 SLC19A1
nsv834111 Chr.21:45423171 - 45585330 on Build GRCh38 Loss MIR6815 COL18A1 SLC19A1 COL18A1-AS1
nsv1061760 Chr.21:45466796 - 45511534 on Build GRCh38 Gain MIR6815 COL18A1 SLC19A1

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