Hs02234818_cn

• Gene Symbol: MIR6816
• Assay Reference Genome Location: Chr.22:20114685 on build GRCh38
• Cytoband: 22q11.21

Target Gene Details

• Entrez Gene ID: 102465490
• Gene Name: microRNA 6816
• Gene Aliases: hsa-mir-6816
• Location: Chr.22:20114686-20114751 on Build GRCh38
• Assay Gene Location: Overlaps - Exon 1

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
MIR6816	NR_106874.1

Target Gene Details

• Entrez Gene ID: 27037
• Gene Name: tRNA methyltransferase 2 homolog A
• Gene Aliases: HTF9C
• Location: Chr.22:20111866-20117305 on Build GRCh38
• Assay Gene Location: Overlaps Intron 6 - Exon 7

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
TRMT2A	NM_001257994.1			NP_001244923.1
	NM_022727.5			NP_073564.3
	NM_182984.4			NP_892029.2
	XM_011530139.2			XP_011528441.1
	XM_011530141.1			XP_011528443.1
	XM_011530142.2			XP_011528444.1
	XM_017028770.1			XP_016884259.1
	AK025106.1			BAB15067.1
	AK057029.1			BAB71349.1
	BC013352.2			AAH13352.2
	BC017184.2			AAH17184.2
	BC108251.1			AAI08252.1
	CR456354.1			CAG30240.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
dgv726n67	Chr.22:20070444 - 20324465 on Build GRCh38	Gain	MIR6816 RANBP1 TRMT2A DGCR8 RTN4R DGCR6L ZDHHC8 LOC284865 LOC440792 CCDC188 LINC00896 MIR1286 MIR1306 MIR3618
esv3893434	Chr.22:19470889 - 20343372 on Build GRCh38	Gain	SEPT5-GP1BB CDC45 RANBP1 CLDN5 TRMT2A TBX1 SEPT5 LOC101927859 ZDHHC8 GP1BB LOC284865 MIR185 LOC440792 LINC00895 CCDC188 LINC00896 MIR3618 ARVCF C22orf29 MIR6816 MIR4761 TANGO2 DGCR8 RTN4R GNB1L DGCR6L TXNRD2 COMT MIR1286 MIR1306 UFD1L
esv3647284	Chr.22:19985583 - 20137122 on Build GRCh38	Gain	MIR6816 ZDHHC8 MIR185 RANBP1 TRMT2A TANGO2 MIR1306 MIR3618 ARVCF DGCR8
esv2758825	Chr.22:20038970 - 20321924 on Build GRCh38	Loss	MIR6816 RANBP1 TRMT2A TANGO2 DGCR8 RTN4R DGCR6L ZDHHC8 LOC284865 LOC440792 CCDC188 LINC00896 MIR1286 MIR1306 MIR3618
nsv828938	Chr.22:19691069 - 20324465 on Build GRCh38	Gain	SEPT5-GP1BB RANBP1 TRMT2A TBX1 SEPT5 ZDHHC8 GP1BB LOC284865 MIR185 LOC440792 CCDC188 LINC00896 MIR3618 ARVCF C22orf29 MIR6816 MIR4761 TANGO2 DGCR8 RTN4R GNB1L DGCR6L TXNRD2 COMT MIR1286 MIR1306
nsv828939	Chr.22:19696032 - 20324465 on Build GRCh38	Loss	SEPT5-GP1BB RANBP1 TRMT2A TBX1 SEPT5 ZDHHC8 GP1BB LOC284865 MIR185 LOC440792 CCDC188 LINC00896 MIR3618 ARVCF C22orf29 MIR6816 MIR4761 TANGO2 DGCR8 RTN4R GNB1L DGCR6L TXNRD2 COMT MIR1286 MIR1306
dgv4480n100	Chr.22:20069620 - 20262667 on Build GRCh38	Gain	RTN4R MIR6816 ZDHHC8 LOC284865 CCDC188 RANBP1 TRMT2A LINC00896 MIR1286 MIR1306 MIR3618 DGCR8
dgv4481n100	Chr.22:20114567 - 20291605 on Build GRCh38	Gain	RTN4R MIR6816 ZDHHC8 LOC284865 CCDC188 RANBP1 TRMT2A LINC00896 MIR1286
nsv471183	Chr.22:20018517 - 20319470 on Build GRCh38	Loss	MIR6816 RANBP1 TRMT2A TANGO2 DGCR8 RTN4R DGCR6L ZDHHC8 LOC284865 MIR185 LOC440792 CCDC188 LINC00896 MIR1286 MIR1306 MIR3618
nsv953027	Chr.22:20085378 - 20303977 on Build GRCh38	Deletion	MIR6816 RANBP1 TRMT2A DGCR8 RTN4R ZDHHC8 LOC284865 LOC440792 CCDC188 LINC00896 MIR1286 MIR1306 MIR3618
dgv7983n54	Chr.22:19762002 - 20321870 on Build GRCh38	Gain	C22orf29 MIR6816 MIR4761 RANBP1 TRMT2A TANGO2 TBX1 DGCR8 RTN4R GNB1L DGCR6L ZDHHC8 TXNRD2 LOC284865 MIR185 LOC440792 COMT CCDC188 LINC00896 MIR1286 MIR1306 MIR3618 ARVCF
nsv834133	Chr.22:20029363 - 20176708 on Build GRCh38	Loss	MIR6816 ZDHHC8 MIR185 CCDC188 RANBP1 TRMT2A TANGO2 MIR1306 MIR3618 DGCR8

More Information

• Set Membership: Intragenic, Non-exonic, DGV Variation

Panther Classification:

Molecular Function -

RNA methyltransferase

Gene Ontology Categories:

Process(es)

RNA methylation
RNA processing

Function(s)

nucleotide binding
RNA methyltransferase activity
poly(A) RNA binding