Genomic Map
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Target Gene Details
Entrez Gene ID: | 148398 |
Gene Name: | sterile alpha motif domain containing 11 |
Gene Aliases: |
MRS |
Location: |
Chr.1:925741-944581 on Build GRCh38 |
Assay Gene Location: | Within Intron 7 |
| Gene Symbol | Transcript Accession | Exon Location | Assay Transcript Location | Protein ID |
|---|---|---|---|---|
| SAMD11 | NM_152486.2 | NP_689699.2 | ||
| AK054643.1 | BAB70781.1 | |||
| BC024295.2 | AAH24295.1 | |||
| BC033213.1 | AAH33213.1 | |||
| CN293867.1 | ||||
| JX093066.1 | ||||
| JX093067.1 | ||||
| JX093068.1 | ||||
| JX093069.1 | ||||
| JX093070.1 | ||||
| JX093071.1 | ||||
| JX093072.1 | ||||
| JX093073.1 | ||||
| JX093074.1 | ||||
| JX093075.1 | ||||
| JX093076.1 | ||||
| JX093077.1 | ||||
| JX093078.1 | ||||
| JX093079.1 | ||||
| JX093080.1 | ||||
| JX093081.1 | ||||
| JX093082.1 | ||||
| JX093083.1 | ||||
| JX093084.1 | ||||
| JX093085.1 | ||||
| JX093086.1 | ||||
| JX093087.1 | ||||
| JX093088.1 | ||||
| JX093089.1 | ||||
| JX093090.1 | ||||
| JX093091.1 | ||||
| JX093092.1 | ||||
| JX093093.1 | ||||
| JX093094.1 | ||||
| JX093095.1 | ||||
| JX093096.1 | ||||
| JX093097.1 | ||||
| JX093098.1 | ||||
| JX093099.1 | ||||
| JX093100.1 | ||||
| JX093101.1 | ||||
| JX093102.1 | ||||
| JX093103.1 | ||||
| JX093104.1 | ||||
| JX093105.1 | ||||
| JX093106.1 | ||||
| JX093107.1 | ||||
| JX093108.1 | ||||
| JX093109.1 | ||||
| JX093110.1 |
Target Copy Number Variation Details
DGV Version: |
Release date: 2016-05-15, GRCh GRCh38 |
| Target Variation |
Location | CNV Subtype |
Genes |
|---|---|---|---|
| dgv15n54 | Chr.1:934063 - 943937 on Build GRCh38 | Loss |
 SAMD11
|
| esv2762302 | Chr.1:914637 - 1106320 on Build GRCh38 | Gain |
LOC284600
LOC100288175
NOC2L
ISG15
LOC105378948
C1orf159
PLEKHN1
KLHL17
LOC107985728
PERM1
HES4
AGRN
SAMD11
LOC100130417
RNF223
|
| nsv482937 | Chr.1:10001 - 2368561 on Build GRCh38 | Loss |
SLC35E2
LOC101928626
LOC105378949
NADK
LOC105378948
ATAD3B
MIR6808
TNFRSF18
FAM138A
CALML6
ATAD3C
AURKAIP1
CDK11A
SDF4
LOC100288175
FAAP20
MTND2P28
PLEKHN1
MRPL20
CFAP74
LOC100506504
LOC100134822
CPSF3L
MIR6727
LOC107984841
TMEM240
SKI
TTLL10
LOC148413
FAM41C
DDX11L1
B3GALT6
TMEM88B
MXRA8
LOC102724312
MIR6859-1
OR4F29
LOC100132287
PERM1
MTND1P23
MIR6723
LOC102725121
LOC284600
OR4F16
MIB2
LOC105378592
SSU72
SLC35E2B
ANKRD65
LOC100287934
ATAD3A
TTLL10-AS1
RNF223
ACAP3
LOC100133331
TAS1R3
TMEM52
NOC2L
FNDC10
LOC105378947
MIR6859-2
PRKCZ
MIR429
SAMD11
FAM132A
FAM87B
MIR1302-2
LOC729737
CPTP
CDK11B
GABRD
TNFRSF4
C1orf159
WASH7P
MIR200A
MIR6726
KLHL17
LOC107985728
DVL1
MMP23A
SCNN1D
LOC107985729
LOC100129534
LINC01342
LOC100288069
MIR200B
OR4F5
AGRN
PUSL1
LINC00115
MMP23B
ISG15
LOC105378589
VWA1
CCNL2
GNB1
HES4
LOC100130417
UBE2J2
LOC105378591
LINC01128
MORN1
|
| nsv950451 | Chr.1:899421 - 1094520 on Build GRCh38 | Deletion |
LOC284600
LOC100288175
NOC2L
ISG15
LOC105378948
C1orf159
PLEKHN1
KLHL17
LOC107985728
PERM1
HES4
AGRN
SAMD11
LOC100130417
RNF223
|
| nsv509035 | Chr.1:891406 - 985724 on Build GRCh38 | Insertion |
LOC284600
KLHL17
LOC107985728
PERM1
SAMD11
LOC100130417
NOC2L
PLEKHN1
|
| dgv8n54 | Chr.1:925754 - 943937 on Build GRCh38 | Loss |
SAMD11
|
| nsv428334 | Chr.1:874371 - 1220569 on Build GRCh38 | Gain |
FAM41C
LINC01342
NOC2L
MIR200B
LOC105378948
MIR429
PERM1
AGRN
SAMD11
TNFRSF18
LOC284600
SDF4
LOC100288175
ISG15
TNFRSF4
C1orf159
PLEKHN1
MIR200A
KLHL17
LOC107985728
HES4
LOC100130417
TTLL10-AS1
RNF223
TTLL10
|
| dgv5n100 | Chr.1:585989 - 1114424 on Build GRCh38 | Gain |
FAM41C
LOC100133331
LOC101928626
LOC100288069
NOC2L
LOC105378948
LOC105378947
PERM1
AGRN
SAMD11
MTND1P23
MIR6723
FAM87B
LOC284600
OR4F16
LINC00115
LOC100288175
MTND2P28
ISG15
C1orf159
PLEKHN1
KLHL17
LOC100287934
LOC107985728
HES4
LOC100130417
LOC107984841
RNF223
LINC01128
|
| nsv10161 | Chr.1:776731 - 1777210 on Build GRCh38 | Gain+Loss |
SLC35E2
TAS1R3
NOC2L
NADK
LOC105378948
FNDC10
ATAD3B
MIR6808
MIR429
SAMD11
TNFRSF18
FAM132A
ATAD3C
FAM87B
AURKAIP1
CDK11A
SDF4
CPTP
LOC100288175
CDK11B
TNFRSF4
C1orf159
PLEKHN1
MIR200A
MIR6726
MRPL20
KLHL17
LOC107985728
CPSF3L
MIR6727
DVL1
MMP23A
TMEM240
SCNN1D
TTLL10
LOC148413
LOC107985729
FAM41C
B3GALT6
TMEM88B
LINC01342
LOC100288069
MXRA8
MIR200B
LOC102724312
PERM1
AGRN
PUSL1
LOC284600
LINC00115
MIB2
MMP23B
SSU72
ISG15
SLC35E2B
VWA1
ANKRD65
CCNL2
LOC100287934
ATAD3A
HES4
LOC100130417
UBE2J2
TTLL10-AS1
RNF223
LINC01128
ACAP3
|
| nsv517709 | Chr.1:817186 - 1275912 on Build GRCh38 | Gain+Loss |
FAM41C
B3GALT6
LINC01342
NOC2L
MIR200B
LOC105378948
MIR429
PERM1
AGRN
SAMD11
TNFRSF18
FAM132A
FAM87B
LOC284600
LINC00115
SDF4
LOC100288175
ISG15
TNFRSF4
C1orf159
PLEKHN1
MIR200A
KLHL17
LOC107985728
HES4
LOC100130417
UBE2J2
TTLL10-AS1
RNF223
TTLL10
LINC01128
|
| nsv1013524 | Chr.1:939510 - 1161955 on Build GRCh38 | Gain |
LOC100288175
LINC01342
NOC2L
ISG15
LOC105378948
C1orf159
PLEKHN1
KLHL17
PERM1
HES4
AGRN
SAMD11
RNF223
|
| dgv2n67 | Chr.1:877618 - 1426500 on Build GRCh38 | Gain |
B3GALT6
TAS1R3
TMEM88B
LINC01342
NOC2L
MXRA8
MIR200B
LOC105378948
MIR6808
MIR429
PERM1
AGRN
PUSL1
SAMD11
TNFRSF18
FAM132A
LOC284600
AURKAIP1
SDF4
CPTP
LOC100288175
ISG15
TNFRSF4
C1orf159
PLEKHN1
MIR200A
MIR6726
ANKRD65
MRPL20
KLHL17
CCNL2
LOC107985728
CPSF3L
HES4
MIR6727
DVL1
LOC100130417
UBE2J2
TTLL10-AS1
SCNN1D
RNF223
TTLL10
ACAP3
LOC148413
|
| nsv544895 | Chr.1:917392 - 1054900 on Build GRCh38 | Loss |
LOC284600
KLHL17
LOC107985728
PERM1
HES4
AGRN
SAMD11
LOC100130417
NOC2L
ISG15
PLEKHN1
|
| nsv1160644 | Chr.1:939652 - 1220663 on Build GRCh38 | Deletion |
SDF4
LOC100288175
LINC01342
NOC2L
ISG15
MIR200B
LOC105378948
TNFRSF4
C1orf159
PLEKHN1
MIR200A
KLHL17
MIR429
PERM1
HES4
AGRN
SAMD11
TTLL10-AS1
TNFRSF18
RNF223
TTLL10
|
| nsv832980 | Chr.1:848279 - 1007037 on Build GRCh38 | Gain |
FAM41C
LOC284600
KLHL17
LOC107985728
PERM1
HES4
SAMD11
LOC100130417
NOC2L
LINC01128
PLEKHN1
|
| nsv544898 | Chr.1:924665 - 943937 on Build GRCh38 | Gain |
LOC107985728
SAMD11
|
Back To TopMore Information
Set Membership: |
Intragenic
Intronic
Non-exonic
DGV Variation
|
Panther Classification:
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