Hs04677231_cn

• Gene Symbol: LOC101928371
• Assay Reference Genome Location: Chr.2:88545512 on build GRCh38
• Cytoband: 2p11.2

Target Gene Details

• Entrez Gene ID: 101928371
• Gene Name: uncharacterized LOC101928371
• Gene Aliases: -
• Location: Chr.2:88538720-88575610 on Build GRCh38
• Assay Gene Location: Within Intron 2

Gene Symbol	Transcript Accession	Exon Location	Assay Transcript Location	Protein ID
LOC101928371	NR_110236.1

Target Copy Number Variation Details

• DGV Version: Release date: 2016-05-15, GRCh GRCh38

Target Variation	Location	CNV Subtype	Genes
nsv470476	Chr.2:88384248 - 88829483 on Build GRCh38	Gain	EIF2AK3 MIR4436A RPIA TEX37 LOC101928371 FOXI3 LOC101928403 ANKRD36BP2
dgv61n16	Chr.2:87343737 - 90254660 on Build GRCh38	Deletion	LOC107985911 IGKV2-24 IGKV3D-15 FOXI3 ANKRD36BP2 PLGLB2 IGK IGKV1D-8 IGKC RGPD2 LOC101927050 MIR4435-1 LOC730268 MIR4780 IGKV3-20 LOC101928403 THNSL2 SMYD1 FABP1 LINC00152 KRCC1 EIF2AK3 IGKV2-29 MIR4436A RPIA IGKV1D-13 TEX37 IGKV1-5 LOC101928371 IGKV2-26
nsv1072005	Chr.2:87360367 - 90256528 on Build GRCh38	Deletion	LOC107985911 IGKV2-24 IGKV3D-15 FOXI3 ANKRD36BP2 PLGLB2 IGK IGKV1D-8 IGKC RGPD2 LOC101927050 MIR4435-1 LOC730268 MIR4780 IGKV3-20 LOC101928403 THNSL2 SMYD1 FABP1 LINC00152 KRCC1 EIF2AK3 IGKV2-29 MIR4436A RPIA IGKV1D-13 TEX37 IGKV1-5 LOC101928371 IGKV2-26
dgv6947n54	Chr.2:87815738 - 88850700 on Build GRCh38	Gain	THNSL2 SMYD1 FABP1 KRCC1 FOXI3 ANKRD36BP2 EIF2AK3 MIR4436A RPIA TEX37 RGPD2 MIR4780 LOC101928371 LOC101928403
nsv1148611	Chr.2:87360364 - 90256525 on Build GRCh38	Deletion	LOC107985911 IGKV2-24 IGKV3D-15 FOXI3 ANKRD36BP2 PLGLB2 IGK IGKV1D-8 IGKC RGPD2 LOC101927050 MIR4435-1 LOC730268 MIR4780 IGKV3-20 LOC101928403 THNSL2 SMYD1 FABP1 LINC00152 KRCC1 EIF2AK3 IGKV2-29 MIR4436A RPIA IGKV1D-13 TEX37 IGKV1-5 LOC101928371 IGKV2-26
nsv458596	Chr.2:88318068 - 88545622 on Build GRCh38	Gain	TEX37 LOC101928371 FOXI3
nsv582384	Chr.2:87987149 - 88773214 on Build GRCh38	Loss	THNSL2 SMYD1 FABP1 KRCC1 FOXI3 ANKRD36BP2 EIF2AK3 RPIA TEX37 RGPD2 MIR4780 LOC101928371 LOC101928403
nsv582386	Chr.2:88035188 - 89208087 on Build GRCh38	Loss	THNSL2 IGKV2-24 SMYD1 FABP1 KRCC1 FOXI3 ANKRD36BP2 EIF2AK3 MIR4436A IGK RPIA IGKC TEX37 IGKV1-5 MIR4780 LOC101928371 IGKV3-20 LOC101928403 IGKV2-26

More Information

Additional Information:

For this assay, SNP(s) [rs79576019] are located under a primer or probe sequence. To help evaluate the possible impact of a given SNP on your experiment, please refer to the 1000 Genomes and NCBI dbSNP databases. A higher minor allele frequency in your study population represents a higher risk to assay performance.

• Set Membership: Intragenic, Intronic, Non-exonic, DGV Variation