Hs00975689_m1

• Gene Symbol: SYNJ2
• Gene Name: synaptojanin 2
• Gene Aliases: INPP5H
• Chromosome Location: Chr.6: 157981856 - 158099176 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: SYNJ2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001178088.1	NP_001171559.1	1 - 2	236		98
	NM_003898.3	NP_003889.1	2 - 3	313		98
	XM_006715592.3	XP_006715655.1	2 - 3	313		98
	XM_011536224.1	XP_011534526.1	2 - 3	313		98
	XM_011536225.1	XP_011534527.1	2 - 3	353		98
	XM_011536227.2	XP_011534529.1	2 - 3	313		98
	XM_011536230.2	XP_011534532.1	2 - 3	313		98
GenBank mRNA	AF318616.1	-	2 - 3	290		98
	AK294480.1	-	2 - 3	313		98
	AY152396.1	-	2 - 3	215		98
	BX648749.1	-	1 - 2	143		98
	DA327619.1	-	1 - 2	236		98

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0600010002.hg
This assay targets the same location as HTA transcript cluster(s) TC06001128.hg

Additional Information:

This assay is in the 5'UTR region of the NM_001178088.1,XM_011536225.1 transcripts.

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene SYNJ2

Panther Classification:

Molecular Function -

phosphatase

Gene Ontology Categories:

Process(es)

phosphatidylinositol biosynthetic process
phosphatidylinositol-3-phosphate biosynthetic process
phosphatidylinositol dephosphorylation

Function(s)

nucleotide binding
RNA binding
phosphatidylinositol-3-phosphatase activity
phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity
protein binding
phosphatidylinositol phosphate 4-phosphatase activity
phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR06013412.hg.1	ENST00000355585.4	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06013412.hg.1	ENST00000367121.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06013412.hg.1	ENST00000367122.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06013412.hg.1	ENST00000449859.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR06013412.hg.1	NM_001178088.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06013412.hg.1	NM_003898.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06013412.hg.1	TC06001128.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR06013408.hg.1	NM_001178088.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR06013408.hg.1	TC06001128.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR0600168271.hg.1	NM_001178088.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600168271.hg.1	NM_001178088.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600168271.hg.1	TC0600010002.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	ENST00000355585.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	ENST00000367113.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	ENST00000449320.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	NM_001178088.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	NM_003898.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	ENST00000355585.8	Ensembl
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	ENST00000367113.4	Ensembl
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	ENST00000449320.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	NM_001178088.1	Refseq
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	NM_003898.3	Refseq
Affymetrix Human Clariom D Assay	PSR0600168274.hg.1	TC0600010002.hg.1	Clariom D TC