Hs00985435_m1

• Gene Symbol: HMGCS2
• Gene Name: 3-hydroxy-3-methylglutaryl-CoA synthase 2
• Gene Aliases: -
• Chromosome Location: Chr.1: 119747996 - 119769125 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: HMGCS2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001166107.1	NP_001159579.1	6 - 7	1258		89
	NM_005518.3	NP_005509.1	7 - 8	1384		89
	XM_011541313.1	XP_011539615.1	6 - 7	1412		89
GenBank mRNA	AK301594.1	-	6 - 7	1041		89
	AK302276.1	-	6 - 7	1227		89
	AK303777.1	-	6 - 7	1231		89
	AK313590.1	-	7 - 8	1343		89
	BC044217.1	-	7 - 8	1337	5744956	89
	CR456850.1	-	8 - 9	1296		89
	U12789.1	-	6 - 7	863		89
	X83618.1	-	7 - 8	1347		89

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0100015476.hg.1
This assay targets the same location as HTA transcript cluster(s) TC01003050.hg.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene HMGCS2

Gene Ontology Categories:

Process(es)

kidney development
liver development
cholesterol biosynthetic process
brain development
midgut development
response to nutrient
isoprenoid biosynthetic process
response to temperature stimulus
response to metal ion
lung development
cellular response to insulin stimulus
multicellular organismal response to stress
response to testosterone
response to glucagon
response to triglyceride
response to monosaccharide
response to prostaglandin F
response to drug
response to starvation
response to ethanol
ketone body biosynthetic process
response to cAMP
response to growth hormone
adipose tissue development
response to linoleic acid
cellular response to lipopolysaccharide
cellular response to amino acid stimulus
cellular response to glucocorticoid stimulus
cellular response to fatty acid

Function(s)

hydroxymethylglutaryl-CoA synthase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000476640.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000476640.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000476640.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000476640.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01047486.hg.1	TC01003050.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	PSR01047486.hg.1	ENST00000369406.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01047486.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR01047486.hg.1	NM_001166107.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR01047486.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000472375.5	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000476640.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000476640.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000476640.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000476640.1	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	TC0100015476.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100215536.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100215536.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100215536.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100215536.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100215536.hg.1	ENST00000369406.7	Ensembl
Affymetrix Human Clariom D Assay	PSR0100215536.hg.1	ENST00000544913.2	Ensembl
Affymetrix Human Clariom D Assay	PSR0100215536.hg.1	NM_001166107.1	Refseq
Affymetrix Human Clariom D Assay	PSR0100215536.hg.1	NM_005518.3	Refseq
Affymetrix Human Clariom D Assay	PSR0100215536.hg.1	TC0100015476.hg.1	Clariom D TC