Hs00990074_g1

• Gene Symbol: COL17A1
• Gene Name: collagen type XVII alpha 1
• Gene Aliases: BA16H23.2, BP180, BPA-2, BPAG2, ERED, LAD-1
• Chromosome Location: Chr.10: 104031288 - 104085880 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: COL17A1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_000494.3	NP_000485.3	49 - 50	3673		69
GenBank mRNA	AB900157.1	-	48 - 49	3504		69
	M91669.1	-	49 - 50	3609		69

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000011740.hg.1
This assay targets the same location as HTA transcript cluster(s) TC10001637.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene COL17A1

Panther Classification:

Molecular Function -

extracellular matrix structural protein

Gene Ontology Categories:

Process(es)

cell-matrix adhesion
epidermis development
hemidesmosome assembly
regulation of immune response

Function(s)

protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR10021421.hg.1	ENST00000353479.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10021421.hg.1	ENST00000541872.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR10021421.hg.1	NM_000494.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR10021421.hg.1	TC10001637.hg.1	HTA TC
Affymetrix Human Clariom D Assay	PSR1000180351.hg.1	ENST00000353479.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1000180351.hg.1	NM_000494.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000180351.hg.1	ENST00000353479.9	Ensembl
Affymetrix Human Clariom D Assay	PSR1000180351.hg.1	NM_000494.3	Refseq
Affymetrix Human Clariom D Assay	PSR1000180351.hg.1	TC1000011740.hg.1	Clariom D TC