Hs01026252_g1

• Gene Symbol: BARX1
• Gene Name: BARX homeobox 1
• Gene Aliases: -
• Chromosome Location: Chr.9: 93951627 - 93955326 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: BARX1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_021570.3	NP_067545.3	2 - 3	699		62
GenBank mRNA	AF213356.1	-	2 - 3	691		62
	BC009458.1	-	1 - 2	546		62
	BC064363.1	-	2 - 3	744	5555949	62

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC0900010849.hg.1
This assay targets the same location as HTA transcript cluster(s) TC09001351.hg.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Homo sapiens, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene BARX1

Panther Classification:

Molecular Function -

homeodomain transcription factor

Gene Ontology Categories:

Process(es)

regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
cell-cell signaling
nervous system development
tissue development
anterior/posterior pattern specification
negative regulation of Wnt signaling pathway
epithelial cell differentiation
positive regulation of transcription from RNA polymerase II promoter
animal organ development
spleen development
digestive system development

Function(s)

RNA polymerase II regulatory region sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding
transcription factor activity, sequence-specific DNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR09016899.hg.1	ENST00000253968.5	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09016899.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR09016899.hg.1	NM_021570.3	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR09016899.hg.1	TC09001351.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Transcriptome Array 2.0	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900173785.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900173785.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900173785.hg.1	NM_021570.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900173785.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Clariom D Assay	PSR0900173785.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Clariom D Assay	PSR0900173785.hg.1	NM_021570.3	Refseq
Affymetrix Human Clariom D Assay	PSR0900173785.hg.1	TC0900010849.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000253968.10	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	ENST00000401724.1	Ensembl
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	NM_021570.3	Refseq
Affymetrix Human Clariom D Assay	TC0900010849.hg.1	NM_021570.3	Refseq