CADM3-AS1
Genomic Map
Back To TopAssay Details
| Gene Symbol: CADM3-AS1 | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NR_037870.1 | 4 | 3227 | 98 | ||
| GenBank mRNA | AL050219.1 | - | 1 | 952 | 98 | |
Adjacent Gene Details
| Gene name | Gene Symbol | Alias | Distance | Relative Direction | Location Chromsome | |
|---|---|---|---|---|---|---|
| Upstream | cell adhesion molecule 3 | CADM3 |
BIgR, IGSF4B, NECL1, Necl-1, TSLL1, synCAM3 |
Anti-sense | Chr. 1 - 159171587 - 159203142 on NCBI Build GRCh38 | |
| Downstream | atypical chemokine receptor 1 (Duffy blood group) | ACKR1 |
CCBP1, CD234, DARC, Dfy, FY, GPD, GpFy, WBCQ1 |
7.0kb | Anti-sense | Chr. 1 - 159204013 - 159206500 on NCBI Build GRCh38 |
Back To TopMore Information
Updated Mapping Information
This assay targets the same location as Clariom D transcript cluster(s) TC0100016088.hg.1This assay targets the same location as HTA transcript cluster(s) TC01003385.hg.1
Set Membership: |
Amplicon length between 86 and 100
3' Most
Detect Genomic DNA
Homo sapiens
Both primers and probe map within a single exon
|
MicroArray Probes:
Agilent
Affymetrix
ArrayStar
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent G4851A SurePrint G3 Hmn GE 8x60K Microarray | 36960 | - | - |
| Agilent Whole Human Genome Microarray 4x44K v2 | A_33_P3359953 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix HT HG-U133+ PM Array Plate | 217442_PM_at | - | - |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052864.hg.1 | TC01003385.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052864.hg.1 | ENST00000415675.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052864.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052867.hg.1 | TC01003385.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052867.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000609696.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | ENST00000609696.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052863.hg.1 | TC01003385.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052863.hg.1 | ENST00000415675.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052863.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052865.hg.1 | TC01003385.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052865.hg.1 | ENST00000415675.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052865.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052866.hg.1 | TC01003385.hg.1 | HTA TC |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052866.hg.1 | ENST00000415675.1 | Ensembl |
| Affymetrix Human Transcriptome Array 2.0 | PSR01052866.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222181.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222181.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222181.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222181.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222181.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222181.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222181.hg.1 | TC0100016088.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100222184.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222184.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222184.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222184.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222184.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222184.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222184.hg.1 | TC0100016088.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100222188.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222188.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222188.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222188.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222188.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222188.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222188.hg.1 | TC0100016088.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100222191.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222191.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222191.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222191.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222191.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222191.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222191.hg.1 | TC0100016088.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000609696.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | ENST00000609696.1 | Ensembl |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | TC0100016088.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222186.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222186.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222186.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222186.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222186.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222186.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222186.hg.1 | TC0100016088.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100222189.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222189.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222189.hg.1 | ENST00000609696.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222189.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222189.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222189.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222189.hg.1 | ENST00000609696.1 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222189.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222189.hg.1 | TC0100016088.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100222180.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222180.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222180.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222180.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222180.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222180.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222180.hg.1 | TC0100016088.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100222187.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222187.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222187.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222187.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222187.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222187.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222187.hg.1 | TC0100016088.hg.1 | Clariom D TC |
| Affymetrix Human Clariom D Assay | PSR0100222190.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222190.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222190.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222190.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222190.hg.1 | ENST00000415675.2 | Ensembl |
| Affymetrix Human Clariom D Assay | PSR0100222190.hg.1 | NR_037870.1 | Refseq |
| Affymetrix Human Clariom D Assay | PSR0100222190.hg.1 | TC0100016088.hg.1 | Clariom D TC |
| Human Genome U133 Plus 2.0 Array | 217442_at | - | - |
| Human Genome U133 Plus 2.0 Array | 217442_PM_at | - | - |
| Human Genome U133 Plus 2.0 Array | 216535_at | - | - |
| Human Genome U133 Plus 2.0 Array | 216535_PM_at | - | - |
| Human Genome U133A 2.0 Array | 216535_at | - | - |
| Human Genome U133A 2.0 Array | 217442_at | - | - |
| Human Genome U133A 2.0 Array | 216535_PM_at | - | - |
| Human Genome U133A 2.0 Array | 217442_PM_at | - | - |
| AffymetrixPathwork Diagnostics Pathchip | pw507189 | - | - |
| AffymetrixPathwork Diagnostics Pathchip | pw507602 | - | - |
| Human Genome U95 Set | 39287_at | - | - |
| Human Genome U95 Set | 39287_PM_at | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at3 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at9 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at8 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at6 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at5 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at7 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at4 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at11 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 216535_at2 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at1 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at10 | - | - |
| Affymetrix Human Genome U133 Plus 2.0 Array | 217442_at9 | - | - |
| Human Genome U133 Set | 216535_PM_at | - | - |
| Human Genome U133 Set | 216535_at | - | - |
| Human Genome U133 Set | 217442_at | - | - |
| Human Genome U133 Set | 217442_PM_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A053994 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A053998 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A053987 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A053998 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A053987 | - | - |
| Arraystar Human LncRNA microarray V2.0 | ASHG19A3A053994 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| HumanHT-12 v4 Expression BeadChip | ILMN_3202521 | NR_037870.1 | human_transcriptome |
| HumanHT-12 v4 Expression BeadChip | ILMN_3202521 | AK124069.1 | human_transcriptome |
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