Hs03845634_s1

• Gene Symbol: GCM1
• Gene Name: glial cells missing homolog 1
• Gene Aliases: GCMA, hGCMa
• Chromosome Location: Chr.6: 53125644 - 53262803 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: GCM1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	XM_017011390.1	XP_016866879.1	10	5112		99
GenBank mRNA	AF075013.1	-	1	152		99

Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Transcript Location	Amplicon Length
GenBankmRNA	AI741641.1	-	1			Chr. 6 - 53125644 - 53126108 [+] on Build GRCh38	99
GenBankmRNA	R64634.1	-		133		Chr. - - [-] on Build	99
GenBankmRNA	R62499.1	-		152		Chr. - - [-] on Build	99
GenBankmRNA	R64197.1	-		248		Chr. - - [-] on Build	99
GenBankmRNA	R23810.1	-		151		Chr. - - [-] on Build	99
GenBankmRNA	AI741630.1	-	1			Chr. 6 - 53125644 - 53126108 [+] on Build GRCh38	99
GenBankmRNA	BX092987.1	-	1	150		Chr. 6 - 53125644 - 53126137 [-] on Build GRCh38	99

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	F-box protein 9	FBXO9	FBX9, NY-REN-57, VCIA1, dJ341E18.2	-24.8kb	Anti-sense	Chr. 6 - 53057807 - 53100873 on NCBI Build GRCh38

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Amplicon length between 86 and 100, 3' Most, Detect Genomic DNA, Homo sapiens, Both primers and probe map within a single exon

Gene Ontology Categories:

Process(es)

regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
anatomical structure morphogenesis
gliogenesis
positive regulation of transcription from RNA polymerase II promoter
calcium ion homeostasis
astrocyte fate commitment
positive regulation of syncytium formation by plasma membrane fusion
branching involved in labyrinthine layer morphogenesis
cell differentiation involved in embryonic placenta development

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
protein binding
transcription factor binding
zinc ion binding
histone deacetylase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC0600012063.hg.1	ENST00000566420.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC0600012063.hg.1	ENST00000566420.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012063.hg.1	ENST00000566420.1	Ensembl
Affymetrix Human Clariom D Assay	TC0600012063.hg.1	ENST00000566420.1	Ensembl