Hs04185882_s1 Best Coverage

• Gene Symbol: PSMB11
• Gene Name: proteasome subunit beta 11
• Gene Aliases: BETA5T
• Chromosome Location: Chr.14: 23042167 - 23044060 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PSMB11
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001099780.1	NP_001093250.1	1	655		97
GenBank mRNA	AB299437.1	-	1	596		97
	AK122797.1	-	1	655		97

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1400006672.hg.1
This assay targets the same location as HTA transcript cluster(s) TC14000140.hg.1

• Set Membership: Amplicon length between 86 and 100, Detect Genomic DNA, Recommended Assay, Homo sapiens, Inventoried, Both primers and probe map within a single exon

Panther Classification:

Molecular Function -

protease

Gene Ontology Categories:

Process(es)

MAPK cascade
protein polyubiquitination
stimulatory C-type lectin receptor signaling pathway
antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-dependent
proteolysis
regulation of cellular amino acid metabolic process
anaphase-promoting complex-dependent catabolic process
tumor necrosis factor-mediated signaling pathway
NIK/NF-kappaB signaling
Fc-epsilon receptor signaling pathway
proteasome-mediated ubiquitin-dependent protein catabolic process
regulation of mRNA stability
T cell receptor signaling pathway
positive regulation of ubiquitin-protein ligase activity involved in regulation of mitotic cell cycle transition
Wnt signaling pathway, planar cell polarity pathway
negative regulation of canonical Wnt signaling pathway
positive regulation of canonical Wnt signaling pathway

Function(s)

threonine-type endopeptidase activity
peptidase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	PSR14001210.hg.1	ENST00000408907.2	Ensembl
Affymetrix Human Transcriptome Array 2.0	PSR14001210.hg.1	NM_001099780.1	Refseq
Affymetrix Human Transcriptome Array 2.0	PSR14001210.hg.1	TC14000140.hg.1	HTA TC
Affymetrix Human Transcriptome Array 2.0	TC1400006672.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400006672.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400006672.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400006672.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1400006672.hg.1	NM_001099780.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400006672.hg.1	NM_001099780.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1400006672.hg.1	NM_001099780.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400145627.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1400145627.hg.1	NM_001099780.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400145627.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1400145627.hg.1	NM_001099780.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400145627.hg.1	TC1400006672.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1400006672.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Clariom D Assay	TC1400006672.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Clariom D Assay	TC1400006672.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Clariom D Assay	TC1400006672.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Clariom D Assay	TC1400006672.hg.1	NM_001099780.1	Refseq
Affymetrix Human Clariom D Assay	TC1400006672.hg.1	NM_001099780.1	Refseq
Affymetrix Human Clariom D Assay	TC1400006672.hg.1	NM_001099780.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400145626.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1400145626.hg.1	NM_001099780.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400145626.hg.1	ENST00000408907.3	Ensembl
Affymetrix Human Clariom D Assay	PSR1400145626.hg.1	NM_001099780.1	Refseq
Affymetrix Human Clariom D Assay	PSR1400145626.hg.1	TC1400006672.hg.1	Clariom D TC