Hs04403907_m1

• Gene Symbol: PCAT5
• Gene Name: prostate cancer associated transcript 5 (non-protein coding)
• Gene Aliases: LINC01452, TPCAT-10-36067
• Chromosome Location: Chr.10: 35778302 - 35800920 on Build GRCh38
• Species: Human
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: PCAT5
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NR_110138.1		1 - 2	215		87
GenBank mRNA	KF154780.1	-	1 - 2	215		87

Adjacent Gene Details

	Gene name	Gene Symbol	Alias	Distance	Relative Direction	Location Chromsome
Upstream	frizzled class receptor 8	FZD8	FZ-8, hFZ8	-136.9kb	Anti-sense	Chr. 10 - 35638249 - 35641434 on NCBI Build GRCh38
Downstream	ankyrin repeat domain 30A	ANKRD30A	NY-BR-1	1.3mb	Sense	Chr. 10 - 37125754 - 37235831 on NCBI Build GRCh38

More Information

Updated Mapping Information

This assay targets the same location as Clariom D transcript cluster(s) TC1000007282.hg.1

• Set Membership: Amplicon length between 86 and 100, Homo sapiens, Probe spans exons

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Human Transcriptome Array 2.0	TC1000007282.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007282.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007282.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007282.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Transcriptome Array 2.0	TC1000007282.hg.1	NR_110138.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007282.hg.1	NR_110138.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007282.hg.1	NR_110138.1	Refseq
Affymetrix Human Transcriptome Array 2.0	TC1000007282.hg.1	NR_110138.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000149632.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000149632.hg.1	NR_110138.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000149632.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000149632.hg.1	NR_110138.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000149632.hg.1	TC1000007282.hg.1	Clariom D TC
Affymetrix Human Clariom D Assay	TC1000007282.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007282.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007282.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007282.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Clariom D Assay	TC1000007282.hg.1	NR_110138.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007282.hg.1	NR_110138.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007282.hg.1	NR_110138.1	Refseq
Affymetrix Human Clariom D Assay	TC1000007282.hg.1	NR_110138.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000149630.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000149630.hg.1	NR_110138.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000149630.hg.1	ENST00000626667.1	Ensembl
Affymetrix Human Clariom D Assay	PSR1000149630.hg.1	NR_110138.1	Refseq
Affymetrix Human Clariom D Assay	PSR1000149630.hg.1	TC1000007282.hg.1	Clariom D TC