Mm00435617_m1 Best Coverage

• Gene Symbol: Pgk1
• Gene Name: phosphoglycerate kinase 1
• Gene Aliases: Pgk-1
• Chromosome Location: Chr.X: 106187100 - 106203699 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Pgk1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_008828.3	NP_032854.2	5 - 6	675		137
GenBank mRNA	AK133877.1	-	5 - 6	597		137
	AK145846.1	-	5 - 6	611		137
	AK164440.1	-	5 - 6	597		137
	AK167441.1	-	5 - 6	569		137
	AK167459.1	-	5 - 6	569		137
	AK167710.1	-	5 - 6	568		137
	AK207010.1	-	1 - 2	94		137
	BC023819.1	-	5 - 6	581		137
	BC032167.1	-	5 - 6	581		137
	BC083355.1	-	5 - 6	567	6828087	137
	BC108372.1	-	5 - 6	579	5060103	137
	M15668.1	-	5 - 6	546		137

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00001071.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Endogenous Controls, Recommended Assay, Mus musculus, Mouse Androgen Panel, Mouse Estrogen Panel, Mouse Endogenous Controls, 1700, Inventoried, Mouse_Endogenous_Controls, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Pgk1

Panther Classification:

Molecular Function -

carbohydrate kinase

Gene Ontology Categories:

Process(es)

carbohydrate metabolic process
gluconeogenesis
glycolytic process
phosphorylation

Function(s)

phosphoglycerate kinase activity
ATP binding
ADP binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00007076.mm.1	NM_008828.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00007076.mm.1	TC0X00001071.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00007077.mm.1	NM_008828.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00007077.mm.1	TC0X00001071.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00007075.mm.1	NM_008828.3	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00007075.mm.1	TC0X00001071.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	417446	-	-
ABI Mouse Genome Survey Microarray	768588	-	-