Mm00440153_g1

• Gene Symbol: Ldb1
• Gene Name: LIM domain binding 1
• Gene Aliases: CLIM2, NLI
• Chromosome Location: Chr.19: 46032589 - 46045516 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Ldb1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001113408.1	NP_001106879.1	7 - 8	1007		87
	NM_010697.1	NP_034827.1	7 - 8	1192		87
GenBank mRNA	AB221569.1	-	6 - 7	549		87
	AB250383.1	-	6 - 7	546		87
	AF030333.1	-	7 - 8	710		87
	AK048463.1	-	2 - 3	232		87
	BC013624.1	-	7 - 8	832	3708169	87
	U69270.1	-	7 - 8	1192		87
	U70375.1	-	6 - 7	542		87
	U89488.1	-	7 - 8	790		87

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1900001594.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Mammalian Gene Collection, Detect Genomic DNA, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Ldb1

Panther Classification:

Molecular Function -

transcription cofactor

Gene Ontology Categories:

Process(es)

transcription-dependent tethering of RNA polymerase II gene DNA at nuclear periphery
gastrulation with mouth forming second
hair follicle development
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
multicellular organism development
anterior/posterior axis specification
epithelial structure maintenance
Wnt signaling pathway
cerebellum development
cerebellar Purkinje cell differentiation
cellular component assembly
regulation of DNA-templated transcription, elongation
somatic stem cell population maintenance
histone H3-K4 acetylation
negative regulation of erythrocyte differentiation
positive regulation of cell adhesion
negative regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
positive regulation of hemoglobin biosynthetic process
primitive erythrocyte differentiation
head development
regulation of nucleic acid-templated transcription

Function(s)

transcription factor activity, transcription factor binding
RNA polymerase II activating transcription factor binding
enhancer sequence-specific DNA binding
DNA binding
chromatin binding
transcription cofactor activity
protein binding
enzyme binding
LIM domain binding
protein homodimerization activity
protein self-association

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1900014178.mm.1	NM_001113408.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900014178.mm.1	NM_001113408.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900014178.mm.1	NM_010697.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900014178.mm.1	NM_010697.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900014178.mm.1	TC1900001594.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR1900014177.mm.1	NM_001113408.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900014177.mm.1	NM_001113408.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900014177.mm.1	NM_010697.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900014177.mm.1	NM_010697.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1900014177.mm.1	TC1900001594.mm.1	MTA TC