Mm00459713_m1

• Gene Symbol: Rbfox2
• Gene Name: RNA binding protein, fox-1 homolog (C. elegans) 2
• Gene Aliases: Fbm2, Fxh, Hrnbp2, Rbm9
• Chromosome Location: Chr.15: 77078990 - 77307053 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rbfox2
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001110827.2	NP_001104297.1	4 - 5	1116		116
	NM_001110828.2	NP_001104298.1	3 - 4	658		116
	NM_001110829.2	NP_001104299.1	3 - 4	658		116
	NM_001110830.2	NP_001104300.1	3 - 4	658		116
	NM_001286417.1	NP_001273346.1	3 - 4	658		116
	NM_001286419.1	NP_001273348.1	3 - 4	655		116
	NM_053104.6	NP_444334.3	4 - 5	1116		116
	NM_175387.3	NP_780596.1	4 - 5	1116		116
GenBank mRNA	AF229055.1	-	3 - 4	601		116
	AF387322.1	-	3 - 4	402		116
	AK044929.1	-	3 - 4	633		116
	AK077594.1	-	4 - 5	992		116
	AK139555.1	-	5 - 6	1086		116
	AY659951.1	-	3 - 4	402		116
	AY659952.1	-	3 - 4	402		116
	AY904025.1	-	5 - 6	552		116
	BC002124.1	-	3 - 4	496	3494630	116
	BC027263.1	-	4 - 5	668	3661748	116
	DQ017388.1	-	3 - 4	402		116
	DQ017389.1	-	3 - 4	399		116

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1500001799.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rbfox2

Panther Classification:

Molecular Function -

RNA metabolism protein, RNA processing factor, RNA splicing factor, nucleic acid metabolism protein

Gene Ontology Categories:

Process(es)

regulation of alternative mRNA splicing, via spliceosome
mRNA processing
RNA splicing
regulation of definitive erythrocyte differentiation
radial glia guided migration of Purkinje cell
intracellular estrogen receptor signaling pathway
regulation of RNA splicing
negative regulation of transcription, DNA-templated
dendrite morphogenesis
neuromuscular process controlling balance

Function(s)

nucleotide binding
nucleic acid binding
transcription corepressor activity
RNA binding
mRNA binding
protein binding
transcription factor binding
poly(A) RNA binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	NM_001110827.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	NM_001110828.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	NM_001110829.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	NM_001110830.2	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	NM_001286417.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	NM_001286419.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	NM_053104.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	NM_175387.3.1	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	NM_175387.3	Refseq
Affymetrix Mouse Clariom S Array	PSR1500013997.mm.1	TC1500001799.mm.1	MTA TC