Mm00503108_g1 Best Coverage

• Gene Symbol: Rrp8
• Gene Name: ribosomal RNA processing 8, methyltransferase, homolog (yeast)
• Gene Aliases: 1500003O22Rik, 2900001K19Rik, AW538116
• Chromosome Location: Chr.7: 105731730 - 105737385 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Rrp8
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_025897.2	NP_080173.1	4 - 5	1236		66
	NM_133951.1	NP_598712.1	4 - 5	1270		66
GenBank mRNA	AK005138.1	-	4 - 5	1152		66
	AK013462.1	-	4 - 5	1147		66
	AK045361.1	-	4 - 5	1088		66
	AK077786.1	-	4 - 5	1159		66
	AK154337.1	-	4 - 5	1263		66
	AK154858.1	-	4 - 5	1211		66
	AK165828.1	-	4 - 5	1084		66
	AK170257.1	-	4 - 5	1088		66
	AK172189.1	-	4 - 5	1109		66
	AK172224.1	-	4 - 5	1109		66
	BC022923.1	-	4 - 5	1168	4242458	66
	BC046799.1	-	4 - 5	1143	6403599	66

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0700003988.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Rrp8

Gene Ontology Categories:

Process(es)

chromatin silencing at rDNA
transcription, DNA-templated
regulation of transcription, DNA-templated
rRNA processing
chromatin modification
methylation
cellular response to glucose starvation
regulation of transcription by glucose
positive regulation of cell cycle arrest
intrinsic apoptotic signaling pathway by p53 class mediator

Function(s)

rRNA (adenine-N6,N6-)-dimethyltransferase activity
protein C-terminal carboxyl O-methyltransferase activity
tRNA (guanine-N2-)-methyltransferase activity
methyltransferase activity
C-methyltransferase activity
N-methyltransferase activity
O-methyltransferase activity
S-methyltransferase activity
RNA methyltransferase activity
mRNA methyltransferase activity
tRNA methyltransferase activity
protein methyltransferase activity
2-polyprenyl-6-methoxy-1,4-benzoquinone methyltransferase activity
rRNA methyltransferase activity
rRNA (uridine-2'-O-)-methyltransferase activity
S-adenosylmethionine-dependent methyltransferase activity
rRNA (adenine-N6-)-methyltransferase activity
DNA-methyltransferase activity
tRNA (guanine-N1-)-methyltransferase activity
rRNA (cytosine-C5-)-methyltransferase activity
selenocysteine methyltransferase activity
arginine N-methyltransferase activity
protein-arginine N-methyltransferase activity
lysine N-methyltransferase activity
protein-lysine N-methyltransferase activity
tRNA (uracil) methyltransferase activity
tRNA (guanine) methyltransferase activity
tRNA (adenine) methyltransferase activity
tRNA (cytosine) methyltransferase activity
tRNA (cytosine-5-)-methyltransferase activity
tRNA (adenine-N1-)-methyltransferase activity
rRNA (adenine) methyltransferase activity
rRNA (cytosine) methyltransferase activity
rRNA (guanine) methyltransferase activity
rRNA (uridine) methyltransferase activity
transferase activity
protein C-terminal leucine carboxyl O-methyltransferase activity
1-phenanthrol methyltransferase activity
protein-arginine N5-methyltransferase activity
methylarsonite methyltransferase activity
dimethylarsinite methyltransferase activity
4,5-dihydroxybenzo(a)pyrene methyltransferase activity
1-hydroxypyrene methyltransferase activity
1-hydroxy-6-methoxypyrene methyltransferase activity
methylated histone binding
demethylmenaquinone methyltransferase activity
cobalt-precorrin-6B C5-methyltransferase activity
cobalt-precorrin-7 C15-methyltransferase activity
cobalt-precorrin-5B C1-methyltransferase activity
cobalt-precorrin-3 C17-methyltransferase activity
dimethylamine methyltransferase activity
hydroxyneurosporene-O-methyltransferase activity
tRNA (adenine-57, 58-N(1)-) methyltransferase activity
methylamine-specific methylcobalamin:coenzyme M methyltransferase activity
trimethylamine methyltransferase activity
methanol-specific methylcobalamin:coenzyme M methyltransferase activity
monomethylamine methyltransferase activity
poly(A) RNA binding
P-methyltransferase activity
Se-methyltransferase activity
2-phytyl-1,4-naphthoquinone methyltransferase activity
tRNA (uracil-2'-O-)-methyltransferase activity
tRNA (cytosine-2'-O-)-methyltransferase activity
phosphomethylethanolamine N-methyltransferase activity
tRNA (cytosine-3-)-methyltransferase activity
rRNA (cytosine-2'-O-)-methyltransferase activity
rRNA (cytosine-N4-)-methyltransferase activity
trihydroxyferuloyl spermidine O-methyltransferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0700033244.mm.1	NM_025897.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700033244.mm.1	NM_025897.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0700033244.mm.1	NM_133951.1.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700033244.mm.1	NM_133951.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0700033244.mm.1	TC0700003988.mm.1	MTA TC