Mm00512106_m1 Best Coverage

• Gene Symbol: Cmtr1
• Gene Name: cap methyltransferase 1
• Gene Aliases: 1300018I05Rik, AI451264, Ftsjd2, MTr1, mKIAA0082
• Chromosome Location: Chr.17: 29660601 - 29703359 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Cmtr1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_028791.5	NP_083067.1	4 - 5	614		81
GenBank mRNA	AK005044.2	-	4 - 5	521		81
	AK042060.1	-	4 - 5	560		81
	AK043733.1	-	4 - 5	551		81
	AK049190.1	-	4 - 5	598		81
	AK080379.1	-	4 - 5	615		81
	AK088624.1	-	4 - 5	549		81
	AK150392.1	-	4 - 5	540		81
	AK151194.1	-	4 - 5	540		81
	AK152276.1	-	4 - 5	540		81
	AK152452.1	-	4 - 5	521		81
	AK152799.1	-	4 - 5	540		81
	AK153021.1	-	4 - 5	540		81
	AK153066.1	-	4 - 5	540		81
	AK172883.1	-	1 - 2	97		81
	BC024691.1	-	4 - 5	536	3668655	81

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1700002774.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Mus musculus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Cmtr1

Gene Ontology Categories:

Process(es)

7-methylguanosine mRNA capping
mRNA processing
methylation
mRNA methylation
cap1 mRNA methylation

Function(s)

nucleic acid binding
mRNA (nucleoside-2'-O-)-methyltransferase activity
methyltransferase activity
transferase activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR1700004558.mm.1	NM_028791.6	Refseq
Affymetrix Mouse Clariom S Array	PSR1700004558.mm.1	TC1700002774.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	430204	-	-