Mm00656045_gH Best Coverage

• Gene Symbol: Vps4b
• Gene Name: vacuolar protein sorting 4b (yeast)
• Gene Aliases: 8030489C12Rik, Skd1
• Chromosome Location: Chr.1: 106770788 - 106796725 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Vps4b
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009190.2	NP_033216.2	6 - 7	916		149
GenBank mRNA	AK151023.1	-	6 - 7	870		149
	AK152131.1	-	6 - 7	903		149
	AK165594.1	-		861		149
	AK168270.1	-	6 - 7	807		149
	BC003799.1	-	6 - 7	823	3488471	149
	U10119.1	-	6 - 7	867		149

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0100002900.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Detect Genomic DNA, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Vps4b

Panther Classification:

Molecular Function -

non-motor microtubule binding protein

Gene Ontology Categories:

Process(es)

cell separation after cytokinesis
transport
potassium ion transport
nucleus organization
endosome organization
vacuole organization
cell cycle
mitotic metaphase plate congression
regulation of centrosome duplication
positive regulation of G2/M transition of mitotic cell cycle
protein transport
endosomal transport
viral release from host cell
cholesterol transport
endosome to lysosome transport via multivesicular body sorting pathway
response to lipid
viral budding via host ESCRT complex
ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway
positive regulation of viral process
regulation of viral process
protein depolymerization
cell division
negative regulation of cell death
ubiquitin-independent protein catabolic process via the multivesicular body sorting pathway
regulation of mitotic spindle assembly
positive regulation of viral release from host cell
negative regulation of exosomal secretion
positive regulation of exosomal secretion
positive regulation of centriole elongation
positive regulation of viral life cycle

Function(s)

nucleotide binding
protein binding
ATP binding
protein C-terminus binding
hydrolase activity
ATPase activity
ATPase activity, coupled
identical protein binding
protein homodimerization activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0100023455.mm.1	NM_009190.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0100023455.mm.1	NM_009190.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0100023455.mm.1	TC0100002900.mm.1	MTA TC