Mm00664697_m1

• Gene Symbol: Syp
• Gene Name: synaptophysin
• Gene Aliases: A230093K24Rik, AI848995, Syn, p38
• Chromosome Location: Chr.X: 7638580 - 7653256 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Syp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009305.2	NP_033331.2	1 - 2	149		64
GenBank mRNA	AK034291.1	-	1 - 2	92		64
	AK043756.1	-	1 - 2	46		64
	AK090259.1	-	1 - 2	46		64
	BC052354.1	-	1 - 2	43		64
	BY239748.1	-	1 - 2			64

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00000060.mm.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Mus musculus, 1700, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Syp

Panther Classification:

Molecular Function -

membrane trafficking regulatory protein

Gene Ontology Categories:

Process(es)

transport
endocytosis
chemical synaptic transmission
regulation of neuronal synaptic plasticity
regulation of long-term neuronal synaptic plasticity
regulation of short-term neuronal synaptic plasticity
cellular response to organic substance
regulation of opioid receptor signaling pathway

Function(s)

transporter activity
protein binding
cholesterol binding
syntaxin-1 binding
protein domain specific binding
protein complex binding
SH2 domain binding
identical protein binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00000290.mm.1	NM_009305.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00000290.mm.1	NM_009305.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00000290.mm.1	TC0X00000060.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00000297.mm.1	NM_009305.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00000297.mm.1	NM_009305.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00000297.mm.1	TC0X00000060.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00000291.mm.1	NM_009305.2.1	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00000291.mm.1	NM_009305.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00000291.mm.1	TC0X00000060.mm.1	MTA TC

Array Name	Probe IDs	Targets	Target Type
ABI Mouse Genome Survey Microarray	534686	-	-