Mm00802006_mH

• Gene Symbol: Kdm6a
• Gene Name: lysine (K)-specific demethylase 6A
• Gene Aliases: Utx
• Chromosome Location: Chr.X: 18162533 - 18279791 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Kdm6a
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_009483.1	NP_033509.1	23 - 24	3776		148
GenBank mRNA	AJ002730.1	-	22 - 23	3235		148
	AK144654.1	-	21 - 22	3611		148
	AK164248.1	-	4 - 5	393		148
	BC027130.1	-	11 - 12	2223		148
	BC053433.1	-	23 - 24	3776	6516368	148
	BC075703.1	-	14 - 15	2686		148

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC0X00000190.mm.1

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, Mammalian Gene Collection, Mus musculus, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Kdm6a

Panther Classification:

Molecular Function -

chromatin/chromatin-binding, or -regulatory protein

Gene Ontology Categories:

Process(es)

in utero embryonic development
neural tube closure
heart morphogenesis
respiratory system process
heart development
regulation of gene expression
chromatin modification
neural tube development
somite rostral/caudal axis specification
multicellular organism growth
mesodermal cell differentiation
embryonic organ development
notochord morphogenesis
oxidation-reduction process
canonical Wnt signaling pathway
histone H3-K27 demethylation
cardiovascular system development

Function(s)

sulfonate dioxygenase activity
RNA polymerase II core promoter proximal region sequence-specific DNA binding
chromatin binding
protein binding
oxidoreductase activity
2,4-dichlorophenoxyacetate alpha-ketoglutarate dioxygenase activity
procollagen-proline dioxygenase activity
hypophosphite dioxygenase activity
identical protein binding
DNA-N1-methyladenine dioxygenase activity
metal ion binding
dioxygenase activity
C-19 gibberellin 2-beta-dioxygenase activity
C-20 gibberellin 2-beta-dioxygenase activity
histone demethylase activity (H3-K27 specific)

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Affymetrix Mouse Clariom S Array	PSR0X00001206.mm.1	NM_009483.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001206.mm.1	TC0X00000190.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001204.mm.1	NM_009483.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001204.mm.1	TC0X00000190.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001203.mm.1	NM_009483.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001203.mm.1	TC0X00000190.mm.1	MTA TC
Affymetrix Mouse Clariom S Array	PSR0X00001205.mm.1	NM_009483.2	Refseq
Affymetrix Mouse Clariom S Array	PSR0X00001205.mm.1	TC0X00000190.mm.1	MTA TC