Mm01265944_m1 Best Coverage

• Gene Symbol: Nfatc1
• Gene Name: nuclear factor of activated T cells, cytoplasmic, calcineurin dependent 1
• Gene Aliases: 2210017P03Rik, AI449492, AV076380, NF-ATc, NFAT2, NFATc, Nfatcb
• Chromosome Location: Chr.18: 80606205 - 80713071 on Build GRCm38
• Species: Mouse
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Nfatc1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_001164109.1	NP_001157581.1	5 - 6	2074		79
	NM_001164110.1	NP_001157582.1	5 - 6	2074		79
	NM_001164111.1	NP_001157583.1	5 - 6	1782		79
	NM_001164112.1	NP_001157584.1	5 - 6	1782		79
	NM_016791.4	NP_058071.2	5 - 6	1782		79
	NM_198429.2	NP_940821.1	5 - 6	2074		79
GenBank mRNA	AF049606.1	-	5 - 6	1735		79
	AF087434.1	-	5 - 6	1769		79
	AF239169.1	-	5 - 6	1772		79
	AK004810.1	-	5 - 6	1740		79
	AK048610.1	-	5 - 6	2076		79
	AK144965.1	-	5 - 6	2075		79
	BC061509.1	-	5 - 6	2061	5354603	79
	EU887567.1	-	5 - 6	1769		79
	EU887568.1	-	5 - 6	1769		79
	EU887569.1	-	5 - 6	1727		79
	EU887570.1	-	5 - 6	1769		79
	EU887571.1	-	5 - 6	1727		79
	EU887572.1	-	5 - 6	1727		79

More Information

Updated Mapping Information

This assay targets the same location as MTA transcript cluster(s) TC1800001665.mm.1

• Set Membership: Ambion siRNA available, Amplicon length between 71 and 85, Mammalian Gene Collection, Recommended Assay, Mus musculus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Nfatc1

Panther Classification:

Molecular Function -

Rel homology transcription factor

Gene Ontology Categories:

Process(es)

G1/S transition of mitotic cell cycle
negative regulation of transcription from RNA polymerase II promoter
epithelial to mesenchymal transition
lymphangiogenesis
B-1a B cell differentiation
heart valve morphogenesis
aortic valve morphogenesis
pulmonary valve morphogenesis
transcription, DNA-templated
regulation of transcription, DNA-templated
regulation of transcription from RNA polymerase II promoter
transcription from RNA polymerase II promoter
calcium ion transport
heart development
positive regulation of gene expression
transition between fast and slow fiber
osteoclast differentiation
calcineurin-NFAT signaling cascade
intracellular signal transduction
regulation of hair cycle
cell quiescence
negative regulation of osteoblast differentiation
positive regulation of transcription, DNA-templated
positive regulation of transcription from RNA polymerase II promoter
ventricular septum morphogenesis
patterning of lymph vessels
heart trabecula morphogenesis
negative regulation of stem cell proliferation

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II core promoter sequence-specific DNA binding
RNA polymerase II distal enhancer sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
RNA polymerase II transcription factor binding
transcriptional activator activity, RNA polymerase II distal enhancer sequence-specific binding
RNA polymerase II transcription coactivator binding
transcriptional repressor activity, RNA polymerase II transcription regulatory region sequence-specific binding
DNA binding
chromatin binding
transcription factor activity, sequence-specific DNA binding
transcription factor activity, RNA polymerase II distal enhancer sequence-specific binding
protein binding
transcription factor binding
sequence-specific DNA binding
transcription regulatory region DNA binding
mitogen-activated protein kinase p38 binding