Ppm1a
Genomic Map
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| Gene Symbol: Ppm1a | ||||||
|---|---|---|---|---|---|---|
| Interrogated Sequence | Translated Protein | Exon Boundary | Assay Location | IMAGE Clone ID | Amplicon Length | |
| RefSeq | NM_017038.1 | NP_058734.1 | 4 - 5 | 1150 | 124 | |
| XM_006240193.2 | XP_006240255.1 | 4 - 5 | 4453 | 124 | ||
| XM_006240194.2 | XP_006240256.1 | 4 - 5 | 1407 | 124 | ||
| XM_006240195.2 | XP_006240257.1 | 4 - 5 | 1171 | 124 | ||
| GenBank mRNA | BC097333.1 | - | 580 | 124 | ||
| J04503.1 | - | 4 - 5 | 1150 | 124 | ||
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Updated Mapping Information
This assay targets the same location as RTA transcript cluster(s) TC0600000949.rn.1Set Membership: |
Ambion siRNA available
Amplicon length greater than or equal to 101
Protein Phosphatase
Mammalian Gene Collection
Recommended Assay
Rattus norvegicus
1700
Inventoried
Probe spans exons
|
Matching Ambion siRNAs:
Gene Ontology Categories:
Function(s)
Process(es)
protein dephosphorylation
N-terminal protein myristoylation
negative regulation of SMAD protein complex assembly
Wnt signaling pathway
dephosphorylation
positive regulation of Wnt signaling pathway
negative regulation of transforming growth factor beta receptor signaling pathway
negative regulation of BMP signaling pathway
peptidyl-threonine dephosphorylation
negative regulation of NF-kappaB import into nucleus
positive regulation of I-kappaB kinase/NF-kappaB signaling
negative regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of transcription, DNA-templated
positive regulation of protein export from nucleus
cellular response to transforming growth factor beta stimulus
magnesium ion binding
phosphoprotein phosphatase activity
protein serine/threonine phosphatase activity
signal transducer activity
protein binding
protein C-terminus binding
manganese ion binding
calmodulin-dependent protein phosphatase activity
R-SMAD binding
protein dephosphorylation
N-terminal protein myristoylation
negative regulation of SMAD protein complex assembly
Wnt signaling pathway
dephosphorylation
positive regulation of Wnt signaling pathway
negative regulation of transforming growth factor beta receptor signaling pathway
negative regulation of BMP signaling pathway
peptidyl-threonine dephosphorylation
negative regulation of NF-kappaB import into nucleus
positive regulation of I-kappaB kinase/NF-kappaB signaling
negative regulation of I-kappaB kinase/NF-kappaB signaling
positive regulation of transcription, DNA-templated
positive regulation of protein export from nucleus
cellular response to transforming growth factor beta stimulus
magnesium ion binding
phosphoprotein phosphatase activity
protein serine/threonine phosphatase activity
signal transducer activity
protein binding
protein C-terminus binding
manganese ion binding
calmodulin-dependent protein phosphatase activity
R-SMAD binding
MicroArray Probes:
Agilent
Affymetrix
ABI
Illumina
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Agilent Whole Rat Genome Microarray 4x44K v2 | A_64_P095484 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 232140 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 854223 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 28499 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 309084 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 488859 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 342928 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 644077 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 227042 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 166068 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 799408 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 960010 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 412405 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 202498 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 328650 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 565224 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 69497 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 877052 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 146716 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 488742 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 170196 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 388380 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 583500 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 747543 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 461135 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 697099 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 874520 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 317366 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 683180 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 1x1M | 525756 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 38461 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 32313 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 37323 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 75560 | - | - |
| Agilent SurePrint G3 Rat CGH Microarray 4x180K | 9019 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P095484 | - | - |
| Agilent Whole Rat Genome Microarray 4x44K v3 | A_64_P095484 | - | - |
| Agilent SurePrint G3 Rat GE 8x60K Microarray | A_64_P095484 | - | - |
| SurePrint G3 Rat Gene Expression Microarray G4131A | A_44_P519963 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 12488 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 84809 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 24361 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 30513 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 78589 | - | - |
| Agilent Rat Genome CGH Microarray 105A (G4436A) | 88514 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Affymetrix Rat Gene 1.0 ST Array | 10885201 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885196 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885199 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885198 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885195 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885200 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885197 | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885194 | - | - |
| Affymetrix Rat Gene 1.1 ST Array | 10885193 | - | - |
| Rat Genome 230 2.0 Array | 1368859_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1383475_at | - | - |
| Rat Genome 230 2.0 Array | 1383475_PM_at | - | - |
| Rat Genome 230 2.0 Array | 1368859_at | - | - |
| Affymetrix HT Rat Focus Array | 1368859_PM_at | - | - |
| Affymetrix HT Rat Focus Array | 1368859_at | - | - |
| Affymetrix Rat Clariom S Assay | PSR0600006401.rn.1 | TC0600000949.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0600006381.rn.1 | TC0600000949.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0600006394.rn.1 | TC0600000949.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0600006395.rn.1 | TC0600000949.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0600006397.rn.1 | TC0600000949.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0600006399.rn.1 | TC0600000949.rn.1 | RTA TC |
| Affymetrix Rat Clariom S Assay | PSR0600006396.rn.1 | TC0600000949.rn.1 | RTA TC |
| Rat Expression Set 230 | 1368859_PM_at | - | - |
| Rat Expression Set 230 | 1368859_at | - | - |
| Affymetrix Rat Gene 1.0 ST Array | 10885193 | - | - |
| Rat Genome U34 Set | J04503_at | - | - |
| Rat Genome U34 Set | J04503_g_at | - | - |
| Rat Genome U34 Set | rc_AA944569_at | - | - |
| Rat Genome U34 Set | rc_AI230501_at | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| ABI Rat Genome Survey Microarray | 21418583 | - | - |
| ABI Rat Genome Survey Microarray | 21482171 | - | - |
| Array Name | Probe IDs | Targets | Target Type |
|---|---|---|---|
| Illumina ratRef-12 v1.0 expression beadchip | ILMN_1352550 | - | - |
| RatRef-12 Expression BeadChip | ILMN_60957 | - | - |
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