Rn00567985_m1 Best Coverage

• Gene Symbol: Lbp
• Gene Name: lipopolysaccharide binding protein
• Gene Aliases: Bpifd2
• Chromosome Location: Chr.3: 154786232 - 154812910 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Lbp
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017208.2	NP_058904.2	1 - 2	147		70
GenBank mRNA	BC101906.1	-	1 - 2	147	7933709	70

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC0300002191.rn.1

• Set Membership: Ambion siRNA available, Amplicon length less than or equal to 70, Mammalian Gene Collection, Recommended Assay, Rattus norvegicus, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Lbp

Gene Ontology Categories:

Process(es)

liver development
leukocyte chemotaxis involved in inflammatory response
macrophage activation involved in immune response
lipid transport
acute-phase response
lipopolysaccharide transport
lipopolysaccharide-mediated signaling pathway
detection of molecule of bacterial origin
response to lipopolysaccharide
negative regulation of tumor necrosis factor production
positive regulation of chemokine production
positive regulation of interleukin-6 production
positive regulation of interleukin-8 production
positive regulation of tumor necrosis factor production
positive regulation of toll-like receptor 4 signaling pathway
positive regulation of tumor necrosis factor biosynthetic process
positive regulation of macrophage activation
negative regulation of growth of symbiont in host
innate immune response
defense response to Gram-negative bacterium
defense response to Gram-positive bacterium
positive regulation of phagocytosis, engulfment
positive regulation of respiratory burst involved in inflammatory response
cellular response to lipopolysaccharide
cellular response to lipoteichoic acid
positive regulation of neutrophil chemotaxis
regulation of membrane permeability

Function(s)

lipopolysaccharide binding
receptor binding
lipoteichoic acid binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_44_P468468	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	702832	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	250962	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	405252	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	491028	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	354033	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	865247	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	164182	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	374670	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	495731	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	19667	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	886196	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	618370	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	621779	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	612064	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	443968	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	416793	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	712749	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	110306	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	704620	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	116472	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	361296	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	91127	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	143246	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	99134	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P468468	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_44_P468468	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_44_P468468	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P468468	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	37587	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	37195	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10841701	-	-
Affymetrix Rat Gene 1.0 ST Array	10841698	-	-
Affymetrix Rat Gene 1.0 ST Array	10841694	-	-
Affymetrix Rat Gene 1.0 ST Array	10841697	-	-
Affymetrix Rat Gene 1.0 ST Array	10841708	-	-
Affymetrix Rat Gene 1.0 ST Array	10841704	-	-
Affymetrix Rat Gene 1.0 ST Array	10841703	-	-
Affymetrix Rat Gene 1.0 ST Array	10841706	-	-
Affymetrix Rat Gene 1.0 ST Array	10841705	-	-
Affymetrix Rat Gene 1.0 ST Array	10841702	-	-
Affymetrix Rat Gene 1.0 ST Array	10841700	-	-
Affymetrix Rat Gene 1.0 ST Array	10841699	-	-
Affymetrix Rat Gene 1.0 ST Array	10841696	-	-
Affymetrix Rat Gene 1.0 ST Array	10841695	-	-
Affymetrix Rat Gene 1.0 ST Array	10841707	-	-
Affymetrix Rat Gene 1.1 ST Array	10841693	-	-
Rat Genome 230 2.0 Array	1387868_PM_at	-	-
Rat Genome 230 2.0 Array	1387868_at	-	-
Affymetrix HT Rat Focus Array	1387868_at	-	-
Affymetrix HT Rat Focus Array	1387868_PM_at	-	-
Affymetrix Rat Clariom S Assay	PSR0300016220.rn.1	TC0300002191.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300016219.rn.1	TC0300002191.rn.1	RTA TC
Affymetrix Rat Clariom S Assay	PSR0300016221.rn.1	TC0300002191.rn.1	RTA TC
Rat Expression Set 230	1387868_at	-	-
Rat Expression Set 230	1387868_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10841693	-	-
Rat Genome U34 Set	L32132_at	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1376661	-	-