Rn00590378_m1 Best Coverage

• Gene Symbol: Slc36a1
• Gene Name: solute carrier family 36 (proton/amino acid symporter), member 1
• Gene Aliases: Lyaat1
• Chromosome Location: Chr.10: 40538013 - 40573304 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Slc36a1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_130415.1	NP_569099.1	7 - 8	874		92
	XM_008767657.1	XP_008765879.1	6 - 7	2973		92
	XM_008767659.1	XP_008765881.1	8 - 9	1556		92
GenBank mRNA	AF361239.1	-	7 - 8	874		92

More Information

Updated Mapping Information

This assay targets the same location as RTA transcript cluster(s) TC1000000619.rn.1

• Set Membership: Ambion siRNA available, Amplicon length between 86 and 100, Transporter, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Slc36a1

Panther Classification:

Molecular Function -

amino acid transporter

Gene Ontology Categories:

Process(es)

neutral amino acid transport
L-alanine transport
glycine transport
proline transport
proton transport
proline transmembrane transport
L-alpha-amino acid transmembrane transport
hydrogen ion transmembrane transport

Function(s)

hydrogen:amino acid symporter activity
L-tyrosine transmembrane transporter activity
hydrogen ion transmembrane transporter activity
neutral amino acid transmembrane transporter activity
L-alanine transmembrane transporter activity
glycine transmembrane transporter activity
L-proline transmembrane transporter activity

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P096487	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	881354	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	200878	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	951463	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	650856	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	675309	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	954723	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	694171	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	759762	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	888755	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	932802	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	155448	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	67440	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	450130	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	577309	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	888838	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	819500	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	208834	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	336164	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	704246	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	602503	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	921823	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	121366	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	154302	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	2590	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P096487	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P096487	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P096487	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_43_P13113	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	60360	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	59885	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	32443	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10733708	-	-
Affymetrix Rat Gene 1.0 ST Array	10733703	-	-
Affymetrix Rat Gene 1.0 ST Array	10733704	-	-
Affymetrix Rat Gene 1.0 ST Array	10733707	-	-
Affymetrix Rat Gene 1.0 ST Array	10733698	-	-
Affymetrix Rat Gene 1.0 ST Array	10733701	-	-
Affymetrix Rat Gene 1.0 ST Array	10733706	-	-
Affymetrix Rat Gene 1.0 ST Array	10733700	-	-
Affymetrix Rat Gene 1.0 ST Array	10733699	-	-
Affymetrix Rat Gene 1.0 ST Array	10733705	-	-
Affymetrix Rat Gene 1.0 ST Array	10733702	-	-
Affymetrix Rat Gene 1.1 ST Array	10733697	-	-
Rat Genome 230 2.0 Array	1369176_at	-	-
Rat Genome 230 2.0 Array	1369176_PM_at	-	-
Affymetrix HT Rat Focus Array	1369176_PM_at	-	-
Affymetrix HT Rat Focus Array	1369176_at	-	-
Affymetrix Rat Clariom S Assay	PSR1000005347.rn.1	TC1000000619.rn.1	RTA TC
Rat Expression Set 230	1369176_at	-	-
Rat Expression Set 230	1369176_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10733697	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	21751708	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1351166	-	-
RatRef-12 Expression BeadChip	ILMN_59940	-	-