Rn00820824_g1 Best Coverage

• Gene Symbol: Gcm1
• Gene Name: glial cells missing homolog 1 (Drosophila)
• Gene Aliases: Gcma
• Chromosome Location: Chr.8: 85355766 - 85369002 on Build Rnor_6.0
• Species: Rat
• Species Specific ID (Flybase ID): -

Assay Details

Gene Symbol: Gcm1
Interrogated Sequence		Translated Protein	Exon Boundary	Assay Location	IMAGE Clone ID	Amplicon Length
RefSeq	NM_017186.2	NP_058882.1	5 - 6	733		120
GenBank mRNA	AF081557.1	-	5 - 6	734		120

More Information

Additional Information:

Based on assay re-evaluation, this assay may detect genomic DNA. Please contact Tech Support if you need more information.

• Set Membership: Ambion siRNA available, Amplicon length greater than or equal to 101, 3' Most, Detect Genomic DNA, Recommended Assay, Rattus norvegicus, 1700, Inventoried, Probe spans exons

Matching Ambion siRNAs:

Click here to find siRNAs for Gene Gcm1

Gene Ontology Categories:

Process(es)

transcription, DNA-templated
regulation of transcription, DNA-templated
transcription from RNA polymerase II promoter
positive regulation of transcription from RNA polymerase II promoter
astrocyte fate commitment
positive regulation of syncytium formation by plasma membrane fusion
branching involved in labyrinthine layer morphogenesis
cell differentiation involved in embryonic placenta development

Function(s)

RNA polymerase II core promoter proximal region sequence-specific DNA binding
RNA polymerase II transcription factor activity, sequence-specific DNA binding
transcriptional activator activity, RNA polymerase II core promoter proximal region sequence-specific binding
DNA binding
transcription factor activity, sequence-specific DNA binding
transcription factor binding
zinc ion binding
histone deacetylase binding

MicroArray Probes:

Array Name	Probe IDs	Targets	Target Type
Agilent Whole Rat Genome Microarray 4x44K v2	A_64_P045952	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	387003	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	691411	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	802242	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	942787	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	82689	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	745335	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	668248	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	459102	-	-
Agilent SurePrint G3 Rat CGH Microarray 1x1M	944185	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	177190	-	-
Agilent SurePrint G3 Rat CGH Microarray 4x180K	167518	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P045952	-	-
Agilent Whole Rat Genome Microarray 4x44K v3	A_64_P045952	-	-
Agilent SurePrint G3 Rat GE 8x60K Microarray	A_64_P045952	-	-
SurePrint G3 Rat Gene Expression Microarray G4131A	A_44_P224403	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	5834	-	-
Agilent Rat Genome CGH Microarray 105A (G4436A)	79181	-	-

Array Name	Probe IDs	Targets	Target Type
Affymetrix Rat Gene 1.0 ST Array	10911777	-	-
Affymetrix Rat Gene 1.0 ST Array	10911775	-	-
Affymetrix Rat Gene 1.0 ST Array	10911779	-	-
Affymetrix Rat Gene 1.0 ST Array	10911778	-	-
Affymetrix Rat Gene 1.0 ST Array	10911776	-	-
Affymetrix Rat Gene 1.0 ST Array	10911774	-	-
Affymetrix Rat Gene 1.1 ST Array	10911773	-	-
Rat Genome 230 2.0 Array	1369506_PM_at	-	-
Rat Genome 230 2.0 Array	1369506_at	-	-
Affymetrix HT Rat Focus Array	1369506_PM_at	-	-
Affymetrix HT Rat Focus Array	1369506_at	-	-
Affymetrix Rat Clariom S Assay	PSR0800008444.rn.1	TC0800001154.rn.1	RTA TC
Rat Expression Set 230	1369506_at	-	-
Rat Expression Set 230	1369506_PM_at	-	-
Affymetrix Rat Gene 1.0 ST Array	10911773	-	-
Rat Genome U34 Set	AF081557_at	-	-
Rat Genome U34 Set	AF081557_at	-	-

Array Name	Probe IDs	Targets	Target Type
ABI Rat Genome Survey Microarray	22148399	-	-

Array Name	Probe IDs	Targets	Target Type
Illumina ratRef-12 v1.0 expression beadchip	ILMN_1351271	-	-
RatRef-12 Expression BeadChip	ILMN_66731	-	-